Difference between revisions of "RXN-8032"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN-7648 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.14.11.9 ec-1.14.11.9] == Reaction formula == * 1 2...")
(Created page with "Category:reaction == Reaction HOMOACONITATE-HYDRATASE-RXN == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/4.2.1.36 ec-4.2.1.36] == Reaction form...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-7648 ==
+
== Reaction HOMOACONITATE-HYDRATASE-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.14.11.9 ec-1.14.11.9]
+
** [http://enzyme.expasy.org/EC/4.2.1.36 ec-4.2.1.36]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CPD-6991]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD-6992]][c] '''+''' 1 [[SUC]][c]
+
* 1 [[HOMO-I-CIT]][c] '''<=>''' 1 [[HOMO-CIS-ACONITATE]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ09771]]
−
* Gene: [[SJ07557]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ14670]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ14677]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ08018]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ14675]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ14672]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5059]], pinobanksin biosynthesis:
+
* [[LYSINE-AMINOAD-PWY]], L-lysine biosynthesis IV:
−
** '''3''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''9''' reactions in the full pathway
 +
* [[P241-PWY]], coenzyme B biosynthesis:
 +
** '''1''' reactions found over '''16''' reactions in the full pathway
 +
* [[PWY-3081]], L-lysine biosynthesis V:
 +
** '''1''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15488 15488]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R07993 R07993]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04371 R04371]
−
{{#set: direction=left-to-right}}
+
* UNIPROT:
−
{{#set: ec-number=ec-1.14.11.9}}
+
** [http://www.uniprot.org/uniprot/Q58409 Q58409]
−
{{#set: nb gene associated=6}}
+
** [http://www.uniprot.org/uniprot/P49367 P49367]
−
{{#set: nb pathway associated=1}}
+
** [http://www.uniprot.org/uniprot/Q9UT74 Q9UT74]
 +
{{#set: direction=reversible}}
 +
{{#set: ec-number=ec-4.2.1.36}}
 +
{{#set: nb gene associated=1}}
 +
{{#set: nb pathway associated=3}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Revision as of 18:59, 14 January 2021

Reaction HOMOACONITATE-HYDRATASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • LYSINE-AMINOAD-PWY, L-lysine biosynthesis IV:
    • 1 reactions found over 9 reactions in the full pathway
  • P241-PWY, coenzyme B biosynthesis:
    • 1 reactions found over 16 reactions in the full pathway
  • PWY-3081, L-lysine biosynthesis V:
    • 1 reactions found over 10 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-8032&oldid=100822"