Difference between revisions of "RXN-8281"

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(Created page with "Category:reaction == Reaction NARINGENIN-CHALCONE-SYNTHASE-RXN == * direction: ** left-to-right * common-name: ** naringenin-chalcone synthase * ec-number: ** [http://enzy...")
(Created page with "Category:reaction == Reaction RXN1G-4355 == * direction: ** left-to-right * common-name: ** cerotoyl-coa carboxylase * ec-number: ** [http://enzyme.expasy.org/EC/6.4.1.3 e...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction NARINGENIN-CHALCONE-SYNTHASE-RXN ==
+
== Reaction RXN1G-4355 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** naringenin-chalcone synthase
+
** cerotoyl-coa carboxylase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1.74 ec-2.3.1.74]
+
** [http://enzyme.expasy.org/EC/6.4.1.3 ec-6.4.1.3]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 3 [[MALONYL-COA]][c] '''+''' 1 [[P-COUMAROYL-COA]][c] '''+''' 3 [[PROTON]][c] '''=>''' 3 [[CARBON-DIOXIDE]][c] '''+''' 4 [[CO-A]][c] '''+''' 1 [[CPD-20012]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[CPD1G-277]][c] '''+''' 1 [[HCO3]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CPD1G-332]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ18059]]
+
* Gene: [[SJ08104]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ12870]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ20077]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6787]], flavonoid biosynthesis (in equisetum):
+
* [[PWYG-321]], mycolate biosynthesis:
−
** '''6''' reactions found over '''10''' reactions in the full pathway
+
** '''26''' reactions found over '''182''' reactions in the full pathway
−
* [[PWY1F-FLAVSYN]], flavonoid biosynthesis:
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5135]], xanthohumol biosynthesis:
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7397]], naringenin biosynthesis (engineered):
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6316]], aromatic polyketides biosynthesis:
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-7897]], flavonoid di-C-glucosylation:
 
−
** '''3''' reactions found over '''15''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11129 11129]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01613 R01613]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q43188 Q43188]
 
−
** [http://www.uniprot.org/uniprot/O04934 O04934]
 
−
** [http://www.uniprot.org/uniprot/P17957 P17957]
 
−
** [http://www.uniprot.org/uniprot/P30081 P30081]
 
−
** [http://www.uniprot.org/uniprot/P30080 P30080]
 
−
** [http://www.uniprot.org/uniprot/Q9S9C0 Q9S9C0]
 
−
** [http://www.uniprot.org/uniprot/Q9S9B9 Q9S9B9]
 
−
** [http://www.uniprot.org/uniprot/P23419 P23419]
 
−
** [http://www.uniprot.org/uniprot/P26018 P26018]
 
−
** [http://www.uniprot.org/uniprot/P22928 P22928]
 
−
** [http://www.uniprot.org/uniprot/P30079 P30079]
 
−
** [http://www.uniprot.org/uniprot/Q01287 Q01287]
 
−
** [http://www.uniprot.org/uniprot/Q01288 Q01288]
 
−
** [http://www.uniprot.org/uniprot/P51078 P51078]
 
−
** [http://www.uniprot.org/uniprot/P51080 P51080]
 
−
** [http://www.uniprot.org/uniprot/P30078 P30078]
 
−
** [http://www.uniprot.org/uniprot/Q01286 Q01286]
 
−
** [http://www.uniprot.org/uniprot/P30073 P30073]
 
−
** [http://www.uniprot.org/uniprot/P30074 P30074]
 
−
** [http://www.uniprot.org/uniprot/P30076 P30076]
 
−
** [http://www.uniprot.org/uniprot/P30077 P30077]
 
−
** [http://www.uniprot.org/uniprot/P51089 P51089]
 
−
** [http://www.uniprot.org/uniprot/P51075 P51075]
 
−
** [http://www.uniprot.org/uniprot/P16107 P16107]
 
−
** [http://www.uniprot.org/uniprot/P51077 P51077]
 
−
** [http://www.uniprot.org/uniprot/P51079 P51079]
 
−
** [http://www.uniprot.org/uniprot/P30075 P30075]
 
−
** [http://www.uniprot.org/uniprot/P51081 P51081]
 
−
** [http://www.uniprot.org/uniprot/P51082 P51082]
 
−
** [http://www.uniprot.org/uniprot/P48390 P48390]
 
−
** [http://www.uniprot.org/uniprot/P48405 P48405]
 
−
** [http://www.uniprot.org/uniprot/P48406 P48406]
 
−
** [http://www.uniprot.org/uniprot/P23569 P23569]
 
−
** [http://www.uniprot.org/uniprot/P13416 P13416]
 
−
** [http://www.uniprot.org/uniprot/P13417 P13417]
 
−
** [http://www.uniprot.org/uniprot/P17818 P17818]
 
−
** [http://www.uniprot.org/uniprot/P13114 P13114]
 
−
** [http://www.uniprot.org/uniprot/P08894 P08894]
 
−
** [http://www.uniprot.org/uniprot/P22924 P22924]
 
−
** [http://www.uniprot.org/uniprot/P22925 P22925]
 
−
** [http://www.uniprot.org/uniprot/P22926 P22926]
 
−
** [http://www.uniprot.org/uniprot/P22927 P22927]
 
−
** [http://www.uniprot.org/uniprot/P06515 P06515]
 
−
** [http://www.uniprot.org/uniprot/P24826 P24826]
 
−
** [http://www.uniprot.org/uniprot/P19168 P19168]
 
−
** [http://www.uniprot.org/uniprot/P24825 P24825]
 
−
** [http://www.uniprot.org/uniprot/P24824 P24824]
 
−
** [http://www.uniprot.org/uniprot/Q40005 Q40005]
 
−
** [http://www.uniprot.org/uniprot/Q96562 Q96562]
 
−
** [http://www.uniprot.org/uniprot/O22047 O22047]
 
−
** [http://www.uniprot.org/uniprot/O04971 O04971]
 
−
** [http://www.uniprot.org/uniprot/P48389 P48389]
 
−
** [http://www.uniprot.org/uniprot/P48398 P48398]
 
−
** [http://www.uniprot.org/uniprot/P48399 P48399]
 
−
** [http://www.uniprot.org/uniprot/Q96568 Q96568]
 
−
** [http://www.uniprot.org/uniprot/P48397 P48397]
 
−
** [http://www.uniprot.org/uniprot/O04966 O04966]
 
−
** [http://www.uniprot.org/uniprot/O04967 O04967]
 
−
** [http://www.uniprot.org/uniprot/O04968 O04968]
 
−
** [http://www.uniprot.org/uniprot/O04969 O04969]
 
−
** [http://www.uniprot.org/uniprot/O04970 O04970]
 
−
** [http://www.uniprot.org/uniprot/Q41292 Q41292]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=naringenin-chalcone synthase}}
+
{{#set: common-name=cerotoyl-coa carboxylase}}
−
{{#set: ec-number=ec-2.3.1.74}}
+
{{#set: ec-number=ec-6.4.1.3}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:32, 5 January 2021

Reaction RXN1G-4355

  • direction:
    • left-to-right
  • common-name:
    • cerotoyl-coa carboxylase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWYG-321, mycolate biosynthesis:
    • 26 reactions found over 182 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-8281&oldid=75547"