Difference between revisions of "RXN-8309"

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(Created page with "Category:reaction == Reaction RXN-10696 == * direction: ** left-to-right * common-name: ** fatty-acyl coenzyme a oxidase ** acyl-coa oxidase * ec-number: ** [http://enzyme...")
(Created page with "Category:reaction == Reaction DGTPTRIPHYDRO-RXN == * direction: ** left-to-right * common-name: ** dgtpase * ec-number: ** [http://enzyme.expasy.org/EC/3.1.5.1 ec-3.1.5.1]...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-10696 ==
+
== Reaction DGTPTRIPHYDRO-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** fatty-acyl coenzyme a oxidase
+
** dgtpase
** acyl-coa oxidase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/1.3.3.6 ec-1.3.3.6]
+
** [http://enzyme.expasy.org/EC/3.1.5.1 ec-3.1.5.1]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-11517]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-11518]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
+
* 1 [[DGTP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[DEOXYGUANOSINE]][c] '''+''' 1 [[P3I]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ13468]]
+
* Gene: [[SJ04566]]
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ03090]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ07451]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ07452]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
* Gene: [[SJ19669]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-735]], jasmonic acid biosynthesis:
 
** '''16''' reactions found over '''19''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15194 15194]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01856 R01856]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P15723 P15723]
 +
** [http://www.uniprot.org/uniprot/P35294 P35294]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=acyl-coa oxidase|fatty-acyl coenzyme a oxidase}}
+
{{#set: common-name=dgtpase}}
{{#set: ec-number=ec-1.3.3.6}}
+
{{#set: ec-number=ec-3.1.5.1}}
{{#set: nb gene associated=5}}
+
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 13:19, 14 January 2021

Reaction DGTPTRIPHYDRO-RXN

  • direction:
    • left-to-right
  • common-name:
    • dgtpase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links