|
|
| Line 1: |
Line 1: |
| − | [[Category:reaction]] | + | [[Category:pathway]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NAG1P-URIDYLTRANS-RXN NAG1P-URIDYLTRANS-RXN] == | + | == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6435 PWY-6435] == |
| − | * direction: | + | * taxonomic-range: |
| − | ** left-to-right | + | ** [http://metacyc.org/META/NEW-IMAGE?object=tax-33090 tax-33090] |
| | * common-name: | | * common-name: |
| − | ** n-acetylglucosamine-1-phosphate uridyltransferase | + | ** 4-hydroxybenzoate biosynthesis v |
| − | * ec-number:
| + | == Reaction(s) found == |
| − | ** [http://enzyme.expasy.org/EC/2.7.7.23 ec-2.7.7.23]
| + | * [[4-COUMARATE--COA-LIGASE-RXN]] |
| − | == Reaction formula == | + | * [[RXN-11244]] |
| − | * 1 [[N-ACETYL-D-GLUCOSAMINE-1-P]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UTP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c] | + | * [[RXN-11245]] |
| − | == Gene(s) associated with this reaction ==
| + | * [[RXN-11246]] |
| − | * Gene: [[SJ16454]] | + | == Reaction(s) not found == |
| − | ** Category: [[annotation]] | + | * [http://metacyc.org/META/NEW-IMAGE?object=3.1.2.23-RXN 3.1.2.23-RXN] |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | + | {{#set: taxonomic-range=tax-33090}} |
| − | ** Category: [[orthology]]
| + | {{#set: common-name=4-hydroxybenzoate biosynthesis v}} |
| − | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| + | {{#set: nb reaction found=4}} |
| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| + | {{#set: completion rate=0.8}} |
| − | * Gene: [[SJ03148]]
| + | {{#set: nb total reaction=5}} |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | == Pathway(s) == | |
| − | * [[PWY0-1261]], anhydromuropeptides recycling I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1261 PWY0-1261] | |
| − | ** '''3''' reactions found over '''12''' reactions in the full pathway
| |
| − | * [[UDPNACETYLGALSYN-PWY]], UDP-N-acetyl-D-glucosamine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=UDPNACETYLGALSYN-PWY UDPNACETYLGALSYN-PWY]
| |
| − | ** '''3''' reactions found over '''6''' reactions in the full pathway
| |
| − | * [[PWY-5514]], UDP-N-acetyl-D-galactosamine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5514 PWY-5514]
| |
| − | ** '''5''' reactions found over '''7''' reactions in the full pathway
| |
| − | * [[UDPNAGSYN-PWY]], UDP-N-acetyl-D-glucosamine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=UDPNAGSYN-PWY UDPNAGSYN-PWY]
| |
| − | ** '''4''' reactions found over '''5''' reactions in the full pathway
| |
| − | == Reconstruction information ==
| |
| − | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
| |
| − | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
| |
| − | == External links ==
| |
| − | * RHEA:
| |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13510 13510]
| |
| − | * LIGAND-RXN:
| |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R00416 R00416]
| |
| − | * UNIPROT:
| |
| − | ** [http://www.uniprot.org/uniprot/Q9PPA2 Q9PPA2]
| |
| − | ** [http://www.uniprot.org/uniprot/Q9JWN3 Q9JWN3]
| |
| − | {{#set: direction=left-to-right}} | |
| − | {{#set: common-name=n-acetylglucosamine-1-phosphate uridyltransferase}} | |
| − | {{#set: ec-number=ec-2.7.7.23}}
| |
| − | {{#set: nb gene associated=2}} | |
| − | {{#set: nb pathway associated=4}}
| |
| − | {{#set: reconstruction category=orthology|annotation}} | |
| − | {{#set: reconstruction tool=pathwaytools|pantograph}}
| |
| − | {{#set: reconstruction comment=n.a}}
| |
| − | {{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}} | |
