Difference between revisions of "RXN-8325"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLMALONYL-COA-DECARBOXYLASE-RXN METHYLMALONYL-COA-DECARBOXYLASE-RXN] == * direction: ** reversi...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9 RXN-9] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.1.3 ec...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLMALONYL-COA-DECARBOXYLASE-RXN METHYLMALONYL-COA-DECARBOXYLASE-RXN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9 RXN-9] ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
−
* common-name:
 
−
** (s)-methylmalonyl-coa decarboxylase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.1.1.41 ec-4.1.1.41]
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** [http://enzyme.expasy.org/EC/2.1.3 ec-2.1.3]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[D-METHYL-MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PROPIONYL-COA]][c]
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* 1 [[CARBAMOYL-P]][c] '''+''' 1 [[L-CANALINE]][c] '''=>''' 1 [[O-UREIDOHOMOSERINE]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ14591]]
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* Gene: [[SJ18541]]
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** Category: [[annotation]]
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** Category: [[orthology]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-5]], canavanine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5 PWY-5]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
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{{#set: direction=left-to-right}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21396 21396]
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{{#set: ec-number=ec-2.1.3}}
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* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00923 R00923]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q57079 Q57079]
 
−
** [http://www.uniprot.org/uniprot/Q56724 Q56724]
 
−
** [http://www.uniprot.org/uniprot/Q57490 Q57490]
 
−
** [http://www.uniprot.org/uniprot/Q57111 Q57111]
 
−
** [http://www.uniprot.org/uniprot/Q57286 Q57286]
 
−
** [http://www.uniprot.org/uniprot/O86517 O86517]
 
−
** [http://www.uniprot.org/uniprot/O52601 O52601]
 
−
** [http://www.uniprot.org/uniprot/O54028 O54028]
 
−
** [http://www.uniprot.org/uniprot/O54029 O54029]
 
−
** [http://www.uniprot.org/uniprot/O54030 O54030]
 
−
** [http://www.uniprot.org/uniprot/O54031 O54031]
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=(s)-methylmalonyl-coa decarboxylase}}
 
−
{{#set: ec-number=ec-4.1.1.41}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Revision as of 14:26, 26 August 2019

Reaction RXN-9

  • direction:
    • left-to-right
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5, canavanine biosynthesis: PWY-5
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-8325&oldid=23524"