Difference between revisions of "RXN-8348"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUCONOKIN-RXN GLUCONOKIN-RXN] == * direction: ** left-to-right * common-name: ** d-gluconate kinas...")
(Created page with "Category:reaction == Reaction RXN-12508 == * direction: ** left-to-right * common-name: ** 2-(α-hydroxyethyl)-tpp:[dihydrolipoyllysine-residue acetyltransferase]-lip...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUCONOKIN-RXN GLUCONOKIN-RXN] ==
+
== Reaction RXN-12508 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** d-gluconate kinase
+
** 2-(α-hydroxyethyl)-tpp:[dihydrolipoyllysine-residue acetyltransferase]-lipoyllysine acetyltransferase
−
* ec-number:
+
** pyruvate dehydrogenase (nad+)
−
** [http://enzyme.expasy.org/EC/2.7.1.12 ec-2.7.1.12]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[GLUCONATE]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CPD-2961]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[2-ALPHA-HYDROXYETHYL-THPP]][c] '''+''' 1 [[Pyruvate-dehydrogenase-lipoate]][c] '''=>''' 1 [[Pyruvate-dehydrogenase-acetylDHlipoyl]][c] '''+''' 1 [[THIAMINE-PYROPHOSPHATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ14827]]
+
* Gene: [[SJ14925]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ00971]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ09312]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ01042]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ19470]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5530]], sorbitol biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5530 PWY-5530]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[IDNCAT-PWY]], L-idonate degradation: [http://metacyc.org/META/NEW-IMAGE?object=IDNCAT-PWY IDNCAT-PWY]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[GLUCONSUPER-PWY]], D-gluconate degradation: [http://metacyc.org/META/NEW-IMAGE?object=GLUCONSUPER-PWY GLUCONSUPER-PWY]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19434 19434]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01737 R01737]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03270 R03270]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P12011 P12011]
 
−
** [http://www.uniprot.org/uniprot/Q9JRF7 Q9JRF7]
 
−
** [http://www.uniprot.org/uniprot/Q8X6W0 Q8X6W0]
 
−
** [http://www.uniprot.org/uniprot/Q9CDN5 Q9CDN5]
 
−
** [http://www.uniprot.org/uniprot/P39208 P39208]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=d-gluconate kinase}}
+
{{#set: common-name=2-(α-hydroxyethyl)-tpp:[dihydrolipoyllysine-residue acetyltransferase]-lipoyllysine acetyltransferase|pyruvate dehydrogenase (nad+)}}
−
{{#set: ec-number=ec-2.7.1.12}}
+
{{#set: nb gene associated=5}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb pathway associated=3}}
 
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 20:39, 18 December 2020

Reaction RXN-12508

  • direction:
    • left-to-right
  • common-name:
    • 2-(α-hydroxyethyl)-tpp:[dihydrolipoyllysine-residue acetyltransferase]-lipoyllysine acetyltransferase
    • pyruvate dehydrogenase (nad+)

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Property "Common-name" (as page type) with input value "2-(α-hydroxyethyl)-tpp:[dihydrolipoyllysine-residue acetyltransferase]-lipoyllysine acetyltransferase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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