Difference between revisions of "RXN-8460"

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(Created page with "Category:reaction == Reaction URPHOS-RXN == * direction: ** reversible * common-name: ** uridine phosphorylase * ec-number: ** [http://enzyme.expasy.org/EC/2.4.2.2 ec-2.4....")
(Created page with "Category:reaction == Reaction 3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN == * direction: ** left-to-right * common-name: ** 3-hydroxyisobutyrate dehydrogenase * ec-number: **...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction URPHOS-RXN ==
+
== Reaction 3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** uridine phosphorylase
+
** 3-hydroxyisobutyrate dehydrogenase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.2.2 ec-2.4.2.2]
+
** [http://enzyme.expasy.org/EC/1.1.1.31 ec-1.1.1.31]
−
** [http://enzyme.expasy.org/EC/2.4.2.3 ec-2.4.2.3]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Pi]][c] '''+''' 1 [[URIDINE]][c] '''<=>''' 1 [[RIBOSE-1P]][c] '''+''' 1 [[URACIL]][c]
+
* 1 [[CPD-12175]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CH3-MALONATE-S-ALD]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ03195]]
+
* Gene: [[SJ14331]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ21390]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ07211]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ16180]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ03584]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY0-1295]], pyrimidine ribonucleosides degradation:
+
* [[VALDEG-PWY]], L-valine degradation I:
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''6''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-5532]], nucleoside and nucleotide degradation (archaea):
 
−
** '''4''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24391 24391]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17682 17682]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01876 R01876]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02047 R02047]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P52624 P52624]
+
** [http://www.uniprot.org/uniprot/P29266 P29266]
−
** [http://www.uniprot.org/uniprot/P43770 P43770]
+
** [http://www.uniprot.org/uniprot/P28811 P28811]
−
** [http://www.uniprot.org/uniprot/Q16831 Q16831]
+
** [http://www.uniprot.org/uniprot/Q8XAE4 Q8XAE4]
−
** [http://www.uniprot.org/uniprot/P12758 P12758]
+
** [http://www.uniprot.org/uniprot/Q55702 Q55702]
−
** [http://www.uniprot.org/uniprot/P19662 P19662]
+
** [http://www.uniprot.org/uniprot/Q9XTI0 Q9XTI0]
−
** [http://www.uniprot.org/uniprot/O08444 O08444]
+
{{#set: direction=left-to-right}}
−
{{#set: direction=reversible}}
+
{{#set: common-name=3-hydroxyisobutyrate dehydrogenase}}
−
{{#set: common-name=uridine phosphorylase}}
+
{{#set: ec-number=ec-1.1.1.31}}
−
{{#set: ec-number=ec-2.4.2.3|ec-2.4.2.2}}
+
{{#set: nb gene associated=5}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb pathway associated=1}}
−
{{#set: nb pathway associated=2}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
−
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:03, 5 January 2021

Reaction 3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • 3-hydroxyisobutyrate dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • VALDEG-PWY, L-valine degradation I:
    • 6 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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