Difference between revisions of "RXN-8583"
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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7440 PWY-7440] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-2037 tax-20...") |
(Created page with "Category:reaction == Reaction DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN == * direction: ** left-to-right * common-name: ** deoxyribodipyrimidine photolyase * ec-number: ** [htt...") |
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| − | [[Category: | + | [[Category:reaction]] |
| − | == | + | == Reaction DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN == |
| − | * | + | * direction: |
| − | ** | + | ** left-to-right |
* common-name: | * common-name: | ||
| − | ** | + | ** deoxyribodipyrimidine photolyase |
| − | == | + | * ec-number: |
| − | * [[ | + | ** [http://enzyme.expasy.org/EC/4.1.99.3 ec-4.1.99.3] |
| − | == | + | == Reaction formula == |
| − | * [http:// | + | * 1 [[DNA-deoxycytidine-thymidine-dimer]][c] '''+''' 1 [[Light]][c] '''=>''' 1 [[DNA-Cytidines]][c] '''+''' 1 [[DNA-thymidines]][c] |
| − | * [http:// | + | == Gene(s) associated with this reaction == |
| − | * [http:// | + | * Gene: [[SJ08112]] |
| − | * [http:// | + | ** Category: [[annotation]] |
| − | * [http:// | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
| − | * [http:// | + | ** Category: [[orthology]] |
| − | * [http:// | + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
| − | {{#set: | + | * Gene: [[SJ04101]] |
| − | {{#set: common-name= | + | ** Category: [[annotation]] |
| − | {{#set: nb | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
| − | {{#set: | + | ** Category: [[orthology]] |
| − | {{#set: | + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
| + | * Gene: [[SJ13192]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| + | == Pathway(s) == | ||
| + | == Reconstruction information == | ||
| + | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | == External links == | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R00034 R00034] | ||
| + | * UNIPROT: | ||
| + | ** [http://www.uniprot.org/uniprot/P12769 P12769] | ||
| + | ** [http://www.uniprot.org/uniprot/Q9JSP8 Q9JSP8] | ||
| + | ** [http://www.uniprot.org/uniprot/Q9HQ46 Q9HQ46] | ||
| + | ** [http://www.uniprot.org/uniprot/P12768 P12768] | ||
| + | ** [http://www.uniprot.org/uniprot/P27526 P27526] | ||
| + | ** [http://www.uniprot.org/uniprot/P25078 P25078] | ||
| + | ** [http://www.uniprot.org/uniprot/Q43125 Q43125] | ||
| + | ** [http://www.uniprot.org/uniprot/P40115 P40115] | ||
| + | ** [http://www.uniprot.org/uniprot/Q28811 Q28811] | ||
| + | ** [http://www.uniprot.org/uniprot/Q24443 Q24443] | ||
| + | ** [http://www.uniprot.org/uniprot/Q91186 Q91186] | ||
| + | ** [http://www.uniprot.org/uniprot/Q42696 Q42696] | ||
| + | ** [http://www.uniprot.org/uniprot/P05066 P05066] | ||
| + | ** [http://www.uniprot.org/uniprot/O24020 O24020] | ||
| + | ** [http://www.uniprot.org/uniprot/O24374 O24374] | ||
| + | ** [http://www.uniprot.org/uniprot/P00914 P00914] | ||
| + | {{#set: direction=left-to-right}} | ||
| + | {{#set: common-name=deoxyribodipyrimidine photolyase}} | ||
| + | {{#set: ec-number=ec-4.1.99.3}} | ||
| + | {{#set: nb gene associated=3}} | ||
| + | {{#set: nb pathway associated=0}} | ||
| + | {{#set: reconstruction category=annotation|orthology}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
| + | {{#set: reconstruction comment=n.a}} | ||
| + | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} | ||
Revision as of 20:46, 18 December 2020
Contents
Reaction DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN
- direction:
- left-to-right
- common-name:
- deoxyribodipyrimidine photolyase
- ec-number:
Reaction formula
- 1 DNA-deoxycytidine-thymidine-dimer[c] + 1 Light[c] => 1 DNA-Cytidines[c] + 1 DNA-thymidines[c]
Gene(s) associated with this reaction
- Gene: SJ08112
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ04101
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ13192
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links
- LIGAND-RXN:
- UNIPROT:
