Difference between revisions of "RXN-8642"
Jump to navigation
Jump to search
(Created page with "Category:reaction == Reaction RXN-16016 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1 ec-2.3.1] == Reaction formula == * 1 ACETYL-C...") |
(Created page with "Category:reaction == Reaction RXN-8642 == <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> * direction: ** reversible * common-name:...") |
||
(6 intermediate revisions by 3 users not shown) | |||
Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN- | + | == Reaction RXN-8642 == |
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
* direction: | * direction: | ||
− | ** | + | ** reversible |
− | * | + | * common-name: |
− | ** | + | ** nadp-dependent isocitrate dehydrogenase |
+ | * synonymous: | ||
+ | ** dual-cofactor-specific isocitrate dehydrogenase | ||
+ | ** idp1 | ||
+ | ** triphosphopyridine nucleotide-linked isocitrate dehydrogenase-oxalosuccinate carboxylase | ||
+ | ** idp | ||
+ | ** oxalsuccinic decarboxylase | ||
+ | ** isocitrate dehydrogenase (nadp-dependent) | ||
+ | ** nadp-dependent isocitric dehydrogenase | ||
+ | ** isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase | ||
+ | ** nadp+-icdh | ||
+ | ** idp2 | ||
+ | ** idp3 | ||
+ | ** idh (ambiguous) | ||
+ | ** nadp-specific isocitrate dehydrogenase | ||
+ | ** nadp+-idh | ||
+ | ** nadp+-linked isocitrate dehydrogenase | ||
+ | ** nadp-linked isocitrate dehydrogenase | ||
+ | ** isocitrate (nadp) dehydrogenase | ||
+ | ** nadp isocitric dehydrogenase | ||
+ | </div> | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[OXALO-SUCCINATE]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
+ | * Gene: [[SJ08749]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
− | |||
− | |||
== Reconstruction information == | == Reconstruction information == | ||
− | * category: [[ | + | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
− | {{#set: direction= | + | * METANETX-RXN : MNXR105305 |
− | {{#set: | + | * RHEA: |
− | {{#set: nb gene associated= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19384 19384] |
− | {{#set: nb pathway associated= | + | * LIGAND-RXN: |
− | {{#set: reconstruction category= | + | ** [http://www.genome.jp/dbget-bin/www_bget?R00268 R00268] |
− | {{#set: reconstruction tool= | + | {{#set: direction=reversible}} |
− | {{#set: reconstruction comment= | + | {{#set: common-name=nadp-dependent isocitrate dehydrogenase}} |
− | {{#set: reconstruction source= | + | {{#set: synonymous=dual-cofactor-specific isocitrate dehydrogenase|idp2|triphosphopyridine nucleotide-linked isocitrate dehydrogenase-oxalosuccinate carboxylase|idp|nadp-dependent isocitric dehydrogenase|oxalsuccinic decarboxylase|idh (ambiguous)|isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase|isocitrate (nadp) dehydrogenase|nadp-linked isocitrate dehydrogenase|nadp+-icdh|nadp+-linked isocitrate dehydrogenase|nadp isocitric dehydrogenase|idp3|nadp+-idh|nadp-specific isocitrate dehydrogenase|isocitrate dehydrogenase (nadp-dependent)|idp1}} |
+ | {{#set: nb gene associated=1}} | ||
+ | {{#set: nb pathway associated=0}} | ||
+ | {{#set: reconstruction category=orthology|annotation}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
+ | {{#set: reconstruction comment=n.a}} | ||
+ | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}} |
Latest revision as of 11:21, 18 March 2021
Contents
Reaction RXN-8642
- direction:
- reversible
- common-name:
- nadp-dependent isocitrate dehydrogenase
- synonymous:
- dual-cofactor-specific isocitrate dehydrogenase
- idp1
- triphosphopyridine nucleotide-linked isocitrate dehydrogenase-oxalosuccinate carboxylase
- idp
- oxalsuccinic decarboxylase
- isocitrate dehydrogenase (nadp-dependent)
- nadp-dependent isocitric dehydrogenase
- isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase
- nadp+-icdh
- idp2
- idp3
- idh (ambiguous)
- nadp-specific isocitrate dehydrogenase
- nadp+-idh
- nadp+-linked isocitrate dehydrogenase
- nadp-linked isocitrate dehydrogenase
- isocitrate (nadp) dehydrogenase
- nadp isocitric dehydrogenase
Reaction formula
- 1 OXALO-SUCCINATE[c] + 1 PROTON[c] <=> 1 2-KETOGLUTARATE[c] + 1 CARBON-DIOXIDE[c]
Gene(s) associated with this reaction
- Gene: SJ08749
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links