Difference between revisions of "RXN-8655"

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(Created page with "Category:reaction == Reaction DTMPKI-RXN == * direction: ** left-to-right * common-name: ** dtmp kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.4.12 ec-2.7.4.12]...")
(Created page with "Category:reaction == Reaction RXN-10659 == * direction: ** left-to-right * common-name: ** 3-oxo-cis-δ9-hexadecenoyl-[acp] reductase ** 3-oxoacyl-[acyl-carrier-prote...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction DTMPKI-RXN ==
+
== Reaction RXN-10659 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** dtmp kinase
+
** 3-oxo-cis-δ9-hexadecenoyl-[acp] reductase
 +
** 3-oxoacyl-[acyl-carrier-protein] reductase (nadph)
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.4.12 ec-2.7.4.12]
+
** [http://enzyme.expasy.org/EC/1.1.1.100 ec-1.1.1.100]
−
** [http://enzyme.expasy.org/EC/2.7.4.13 ec-2.7.4.13]
 
−
** [http://enzyme.expasy.org/EC/2.7.4.9 ec-2.7.4.9]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[TMP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[TDP]][c]
+
* 1 [[3-oxo-cis-D9-hexadecenoyl-ACPs]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-hydroxy-cis-D9-hexaecenoyl-ACPs]][c] '''+''' 1 [[NADP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ01455]]
+
* Gene: [[SJ04229]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ17743]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ13014]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7184]], pyrimidine deoxyribonucleotides de novo biosynthesis I:
+
* [[PWY-6282]], palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate):
−
** '''9''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-6545]], pyrimidine deoxyribonucleotides de novo biosynthesis III:
 
 
** '''8''' reactions found over '''9''' reactions in the full pathway
 
** '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-7187]], pyrimidine deoxyribonucleotides de novo biosynthesis II:
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli):
 
−
** '''14''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-7210]], pyrimidine deoxyribonucleotides biosynthesis from CTP:
 
−
** '''8''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7198]], pyrimidine deoxyribonucleotides de novo biosynthesis IV:
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7197]], pyrimidine deoxyribonucleotide phosphorylation:
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R02094 R02094]
 
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13518 13518]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q57741 Q57741]
 
−
** [http://www.uniprot.org/uniprot/Q9PPF3 Q9PPF3]
 
−
** [http://www.uniprot.org/uniprot/P0A720 P0A720]
 
−
** [http://www.uniprot.org/uniprot/Q8X8H7 Q8X8H7]
 
−
** [http://www.uniprot.org/uniprot/Q9JVE7 Q9JVE7]
 
−
** [http://www.uniprot.org/uniprot/P33803 P33803]
 
−
** [http://www.uniprot.org/uniprot/P42490 P42490]
 
−
** [http://www.uniprot.org/uniprot/P00572 P00572]
 
−
** [http://www.uniprot.org/uniprot/Q80HT9 Q80HT9]
 
−
** [http://www.uniprot.org/uniprot/P68693 P68693]
 
−
** [http://www.uniprot.org/uniprot/P23919 P23919]
 
−
** [http://www.uniprot.org/uniprot/P36590 P36590]
 
−
** [http://www.uniprot.org/uniprot/Q9RA29 Q9RA29]
 
−
** [http://www.uniprot.org/uniprot/O81650 O81650]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=dtmp kinase}}
+
{{#set: common-name=3-oxo-cis-δ9-hexadecenoyl-[acp] reductase|3-oxoacyl-[acyl-carrier-protein] reductase (nadph)}}
−
{{#set: ec-number=ec-2.7.4.13|ec-2.7.4.9|ec-2.7.4.12}}
+
{{#set: ec-number=ec-1.1.1.100}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=3}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:37, 5 January 2021

Reaction RXN-10659

  • direction:
    • left-to-right
  • common-name:
    • 3-oxo-cis-δ9-hexadecenoyl-[acp] reductase
    • 3-oxoacyl-[acyl-carrier-protein] reductase (nadph)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6282, palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate):
    • 8 reactions found over 9 reactions in the full pathway

Reconstruction information

External links

  • Property "Common-name" (as page type) with input value "3-oxo-cis-δ9-hexadecenoyl-[acp] reductase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
  • Property "Common-name" (as page type) with input value "3-oxoacyl-[acyl-carrier-protein] reductase (nadph)" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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