Difference between revisions of "RXN-8655"
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(Created page with "Category:reaction == Reaction RXN-10659 == * direction: ** left-to-right * common-name: ** 3-oxo-cis-δ9-hexadecenoyl-[acp] reductase ** 3-oxoacyl-[acyl-carrier-prote...") |
(Created page with "Category:reaction == Reaction RXN-17918 == * direction: ** left-to-right * common-name: ** dna ligase (atp) == Reaction formula == * 1 5-Phospho-terminated-DNAs[c] '''...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction RXN- | + | == Reaction RXN-17918 == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
| − | ** | + | ** dna ligase (atp) |
| − | |||
| − | |||
| − | |||
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[5-Phospho-terminated-DNAs]][c] '''+''' 1 [[DNA-Ligase-L-lysine-adenylate]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[A-5-prime-PP-5-prime-DNA]][c] '''+''' 1 [[DNA-Ligase-L-lysine]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ19344]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| − | * Gene: [[ | + | * Gene: [[SJ16080]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
| − | * Gene: [[ | + | * Gene: [[SJ15543]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| − | ** Category: [[ | + | * Gene: [[SJ13521]] |
| − | *** Source: [[ | + | ** Category: [[annotation]] |
| + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| − | |||
| − | |||
== Reconstruction information == | == Reconstruction information == | ||
| − | |||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: common-name= | + | {{#set: common-name=dna ligase (atp)}} |
| − | + | {{#set: nb gene associated=4}} | |
| − | {{#set: nb gene associated= | + | {{#set: nb pathway associated=0}} |
| − | {{#set: nb pathway associated= | + | {{#set: reconstruction category=annotation}} |
| − | {{#set: reconstruction category=annotation | + | {{#set: reconstruction tool=pathwaytools}} |
| − | {{#set: reconstruction tool=pathwaytools | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source=saccharina_japonica_genome | + | {{#set: reconstruction source=saccharina_japonica_genome}} |
Revision as of 13:20, 14 January 2021
Contents
Reaction RXN-17918
- direction:
- left-to-right
- common-name:
- dna ligase (atp)
Reaction formula
- 1 5-Phospho-terminated-DNAs[c] + 1 DNA-Ligase-L-lysine-adenylate[c] + 2 PROTON[c] => 1 A-5-prime-PP-5-prime-DNA[c] + 1 DNA-Ligase-L-lysine[c]
Gene(s) associated with this reaction
- Gene: SJ19344
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ16080
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ15543
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ13521
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
Pathway(s)
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
