Difference between revisions of "RXN-8661"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9552 RXN-9552] == * direction: ** left-to-right * common-name: ** 3-oxo-petroslinoyl-[acyl-carr...")
(Created page with "Category:reaction == Reaction RXN-11797 == * direction: ** left-to-right * common-name: ** (r)-3-hydroxydecanoyl-coa synthase * ec-number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9552 RXN-9552] ==
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== Reaction RXN-11797 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** 3-oxo-petroslinoyl-[acyl-carrier protein] reductase
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** (r)-3-hydroxydecanoyl-coa synthase
** 3-oxoacyl-[acyl-carrier-protein] reductase (nadph)
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/1.1.1.100 ec-1.1.1.100]
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** [http://enzyme.expasy.org/EC/2.4.1 ec-2.4.1]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[3-oxo-petroselinoyl-ACPs]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[R-3-hydroxypetroselinoyl-ACPs]][c]
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* 1 [[Beta-hydroxydecanoyl-ACPs]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[CPD-12777]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ13014]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ04229]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ17743]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-5367]], petroselinate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5367 PWY-5367]
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* [[PWY-6657]], polyhydroxydecanoate biosynthesis:
** '''2''' reactions found over '''6''' reactions in the full pathway
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** '''2''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=3-oxo-petroslinoyl-[acyl-carrier protein] reductase|3-oxoacyl-[acyl-carrier-protein] reductase (nadph)}}
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{{#set: common-name=(r)-3-hydroxydecanoyl-coa synthase}}
{{#set: ec-number=ec-1.1.1.100}}
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{{#set: ec-number=ec-2.4.1}}
{{#set: nb gene associated=3}}
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{{#set: nb gene associated=0}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction category=gap-filling}}
{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction tool=meneco}}
{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction comment=added for gapfilling}}
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
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{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}

Revision as of 20:40, 18 December 2020

Reaction RXN-11797

  • direction:
    • left-to-right
  • common-name:
    • (r)-3-hydroxydecanoyl-coa synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6657, polyhydroxydecanoate biosynthesis:
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links