Difference between revisions of "RXN-8668"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction CELLULOSE-SYNTHASE-UDP-FORMING-RXN == * direction: ** left-to-right * common-name: ** cellulose synthase (udp-forming) ** cellulose synthase...")
(Created page with "Category:reaction == Reaction DIACYLGLYKIN-RXN == * direction: ** left-to-right * common-name: ** diacylglycerol kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1....")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction CELLULOSE-SYNTHASE-UDP-FORMING-RXN ==
+
== Reaction DIACYLGLYKIN-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** cellulose synthase (udp-forming)
+
** diacylglycerol kinase
−
** cellulose synthase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.1.12 ec-2.4.1.12]
+
** [http://enzyme.expasy.org/EC/2.7.1.107 ec-2.7.1.107]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CELLULOSE]][c] '''+''' 1 [[CPD-12575]][c] '''=>''' 1 [[CELLULOSE]][c] '''+''' 1 [[UDP]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[DIACYLGLYCEROL]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[L-PHOSPHATIDATE]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* Gene: [[SJ21758]]
+
* Gene: [[SJ03368]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ14860]]
+
* Gene: [[SJ04262]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ21246]]
+
* Gene: [[SJ12057]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ20815]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ12148]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ19854]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ05115]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ01458]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ21252]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ17604]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ21250]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ01459]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ04791]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ05122]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ22256]]
+
* Gene: [[SJ16261]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ09104]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ20814]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
</div>
 
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-1001]], cellulose biosynthesis:
+
* [[PWY-7039]], phosphatidate metabolism, as a signaling molecule:
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7817]], type I lipoteichoic acid biosynthesis (S. aureus):
 +
** '''6''' reactions found over '''16''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10272 10272]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02889 R02889]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02240 R02240]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q59167 Q59167]
+
** [http://www.uniprot.org/uniprot/Q01583 Q01583]
 +
** [http://www.uniprot.org/uniprot/P49621 P49621]
 +
** [http://www.uniprot.org/uniprot/P49619 P49619]
 +
** [http://www.uniprot.org/uniprot/P51556 P51556]
 +
** [http://www.uniprot.org/uniprot/Q9JTJ7 Q9JTJ7]
 +
** [http://www.uniprot.org/uniprot/Q9CGK9 Q9CGK9]
 +
** [http://www.uniprot.org/uniprot/Q9PIN8 Q9PIN8]
 +
** [http://www.uniprot.org/uniprot/O08560 O08560]
 +
** [http://www.uniprot.org/uniprot/P0ABN1 P0ABN1]
 +
** [http://www.uniprot.org/uniprot/P20192 P20192]
 +
** [http://www.uniprot.org/uniprot/P23743 P23743]
 +
** [http://www.uniprot.org/uniprot/Q06119 Q06119]
 +
** [http://www.uniprot.org/uniprot/Q03603 Q03603]
 +
** [http://www.uniprot.org/uniprot/Q39017 Q39017]
 +
** [http://www.uniprot.org/uniprot/Q09103 Q09103]
 +
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=cellulose synthase|cellulose synthase (udp-forming)}}
+
{{#set: common-name=diacylglycerol kinase}}
−
{{#set: ec-number=ec-2.4.1.12}}
+
{{#set: ec-number=ec-2.7.1.107}}
−
{{#set: nb gene associated=15}}
+
{{#set: nb gene associated=6}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=2}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:34, 5 January 2021

Reaction DIACYLGLYKIN-RXN

  • direction:
    • left-to-right
  • common-name:
    • diacylglycerol kinase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7039, phosphatidate metabolism, as a signaling molecule:
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7817, type I lipoteichoic acid biosynthesis (S. aureus):
    • 6 reactions found over 16 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-8668&oldid=76388"