Difference between revisions of "RXN-8673"
Jump to navigation
Jump to search
(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=SO4ASSIM-PWY SO4ASSIM-PWY] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-475...") |
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NAG1P-URIDYLTRANS-RXN NAG1P-URIDYLTRANS-RXN] == * direction: ** left-to-right * common-name: ** n-a...") |
||
| Line 1: | Line 1: | ||
| − | [[Category: | + | [[Category:reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NAG1P-URIDYLTRANS-RXN NAG1P-URIDYLTRANS-RXN] == |
| − | * | + | * direction: |
| − | ** | + | ** left-to-right |
| − | |||
* common-name: | * common-name: | ||
| − | ** | + | ** n-acetylglucosamine-1-phosphate uridyltransferase |
| − | == Reaction(s) | + | * ec-number: |
| − | * [[ | + | ** [http://enzyme.expasy.org/EC/2.7.7.23 ec-2.7.7.23] |
| − | * [[ | + | == Reaction formula == |
| − | == | + | * 1 [[N-ACETYL-D-GLUCOSAMINE-1-P]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UTP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c] |
| − | + | == Gene(s) associated with this reaction == | |
| − | {{#set: | + | * Gene: [[SJ16454]] |
| − | {{#set: common-name= | + | ** Category: [[annotation]] |
| − | {{#set: nb | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
| − | {{#set: | + | ** Category: [[orthology]] |
| − | {{#set: | + | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
| + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
| + | * Gene: [[SJ03148]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| + | == Pathway(s) == | ||
| + | * [[PWY0-1261]], anhydromuropeptides recycling I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1261 PWY0-1261] | ||
| + | ** '''3''' reactions found over '''12''' reactions in the full pathway | ||
| + | * [[UDPNACETYLGALSYN-PWY]], UDP-N-acetyl-D-glucosamine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=UDPNACETYLGALSYN-PWY UDPNACETYLGALSYN-PWY] | ||
| + | ** '''3''' reactions found over '''6''' reactions in the full pathway | ||
| + | * [[PWY-5514]], UDP-N-acetyl-D-galactosamine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5514 PWY-5514] | ||
| + | ** '''5''' reactions found over '''7''' reactions in the full pathway | ||
| + | * [[UDPNAGSYN-PWY]], UDP-N-acetyl-D-glucosamine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=UDPNAGSYN-PWY UDPNAGSYN-PWY] | ||
| + | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| + | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13510 13510] | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R00416 R00416] | ||
| + | * UNIPROT: | ||
| + | ** [http://www.uniprot.org/uniprot/Q9PPA2 Q9PPA2] | ||
| + | ** [http://www.uniprot.org/uniprot/Q9JWN3 Q9JWN3] | ||
| + | {{#set: direction=left-to-right}} | ||
| + | {{#set: common-name=n-acetylglucosamine-1-phosphate uridyltransferase}} | ||
| + | {{#set: ec-number=ec-2.7.7.23}} | ||
| + | {{#set: nb gene associated=2}} | ||
| + | {{#set: nb pathway associated=4}} | ||
| + | {{#set: reconstruction category=orthology|annotation}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
| + | {{#set: reconstruction comment=n.a}} | ||
| + | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}} | ||
Revision as of 14:28, 26 August 2019
Contents
Reaction NAG1P-URIDYLTRANS-RXN
- direction:
- left-to-right
- common-name:
- n-acetylglucosamine-1-phosphate uridyltransferase
- ec-number:
Reaction formula
- 1 N-ACETYL-D-GLUCOSAMINE-1-P[c] + 1 PROTON[c] + 1 UTP[c] => 1 PPI[c] + 1 UDP-N-ACETYL-D-GLUCOSAMINE[c]
Gene(s) associated with this reaction
- Gene: SJ16454
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ03148
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY0-1261, anhydromuropeptides recycling I: PWY0-1261
- 3 reactions found over 12 reactions in the full pathway
- UDPNACETYLGALSYN-PWY, UDP-N-acetyl-D-glucosamine biosynthesis II: UDPNACETYLGALSYN-PWY
- 3 reactions found over 6 reactions in the full pathway
- PWY-5514, UDP-N-acetyl-D-galactosamine biosynthesis II: PWY-5514
- 5 reactions found over 7 reactions in the full pathway
- UDPNAGSYN-PWY, UDP-N-acetyl-D-glucosamine biosynthesis I: UDPNAGSYN-PWY
- 4 reactions found over 5 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
External links
