Difference between revisions of "RXN-8746"

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(Created page with "Category:reaction == Reaction 6PGLUCONOLACT-RXN == * direction: ** left-to-right * common-name: ** 6-phosphogluconolactonase * ec-number: ** [http://enzyme.expasy.org/EC/3...")
(Created page with "Category:reaction == Reaction RXN-7657 == * direction: ** reversible * common-name: ** alcohol dehydrogenase (nad) ** isobutanol dehydrogenase * ec-number: ** [http://enzy...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 6PGLUCONOLACT-RXN ==
+
== Reaction RXN-7657 ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** 6-phosphogluconolactonase
+
** alcohol dehydrogenase (nad)
 +
** isobutanol dehydrogenase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.1.31 ec-3.1.1.31]
+
** [http://enzyme.expasy.org/EC/1.1.1.1 ec-1.1.1.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[D-6-P-GLUCONO-DELTA-LACTONE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-2961]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[ISOBUTANOL]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[CPD-7000]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ07027]]
+
* Gene: [[SJ07759]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ21601]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ10585]]
+
* Gene: [[SJ14768]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[GLYCOLYSIS-E-D]], superpathway of glycolysis and the Entner-Doudoroff pathway:
+
* [[PWY-7396]], butanol and isobutanol biosynthesis (engineered):
−
** '''4''' reactions found over '''2''' reactions in the full pathway
+
** '''4''' reactions found over '''8''' reactions in the full pathway
−
* [[OXIDATIVEPENT-PWY]], pentose phosphate pathway (oxidative branch) I:
+
* [[PWY-5057]], L-valine degradation II:
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[RUMP-PWY]], formaldehyde oxidation I:
+
* [[PWY-7111]], pyruvate fermentation to isobutanol (engineered):
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
−
* [[P122-PWY]], heterolactic fermentation:
 
−
** '''16''' reactions found over '''18''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* METANETX-RXN : MNXR95718
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12557 12557]
+
{{#set: direction=reversible}}
−
* LIGAND-RXN:
+
{{#set: common-name=isobutanol dehydrogenase|alcohol dehydrogenase (nad)}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02035 R02035]
+
{{#set: ec-number=ec-1.1.1.1}}
−
* UNIPROT:
+
{{#set: nb gene associated=3}}
−
** [http://www.uniprot.org/uniprot/P63337 P63337]
+
{{#set: nb pathway associated=3}}
−
{{#set: direction=left-to-right}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: common-name=6-phosphogluconolactonase}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: ec-number=ec-3.1.1.31}}
 
−
{{#set: nb gene associated=2}}
 
−
{{#set: nb pathway associated=4}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 08:37, 15 March 2021

Reaction RXN-7657

  • direction:
    • reversible
  • common-name:
    • alcohol dehydrogenase (nad)
    • isobutanol dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7396, butanol and isobutanol biosynthesis (engineered):
    • 4 reactions found over 8 reactions in the full pathway
  • PWY-5057, L-valine degradation II:
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7111, pyruvate fermentation to isobutanol (engineered):
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR95718





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