Difference between revisions of "RXN-8772"

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(Created page with "Category:reaction == Reaction RXN-17523 == * direction: ** left-to-right * common-name: ** heme oxygenase * ec-number: ** [http://enzyme.expasy.org/EC/1.14.15.20 ec-1.14.1...")
(Created page with "Category:reaction == Reaction RXN-8772 == * direction: ** reversible * common-name: ** l-arabinose reductase * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.21 ec-1.1.1...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-17523 ==
+
== Reaction RXN-8772 ==
 
* direction:
 
* direction:
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
** heme oxygenase
+
** l-arabinose reductase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/1.14.15.20 ec-1.14.15.20]
+
** [http://enzyme.expasy.org/EC/1.1.1.21 ec-1.1.1.21]
 
== Reaction formula ==
 
== Reaction formula ==
* 3 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTOHEME]][c] '''+''' 8 [[PROTON]][c] '''+''' 6 [[Reduced-ferredoxins]][c] '''=>''' 1 [[BILIVERDINE]][c] '''+''' 1 [[CARBON-MONOXIDE]][c] '''+''' 1 [[FE+2]][c] '''+''' 6 [[Oxidized-ferredoxins]][c] '''+''' 3 [[WATER]][c]
+
* 1 [[L-ARABITOL]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[L-arabinopyranose]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ20370]]
+
* Gene: [[SJ05644]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-7578]], phycoviolobilin biosynthesis:
+
* [[PWY-5515]], L-arabinose degradation II:
** '''1''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-7170]], phytochromobilin biosynthesis:
 
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
** '''2''' reactions found over '''3''' reactions in the full pathway
* [[PWY-7845]], heme degradation II:
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
* [[PWY-5917]], phycocyanobilin biosynthesis:
 
** '''1''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-5915]], phycoerythrobilin biosynthesis I:
 
** '''3''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-7580]], phycoerythrobilin biosynthesis II:
 
** '''1''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-7579]], phycourobilin biosynthesis:
 
** '''3''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR107158
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=50233 50233]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25232 25232]
{{#set: direction=left-to-right}}
+
* LIGAND-RXN:
{{#set: common-name=heme oxygenase}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01759 R01759]
{{#set: ec-number=ec-1.14.15.20}}
+
{{#set: direction=reversible}}
 +
{{#set: common-name=l-arabinose reductase}}
 +
{{#set: ec-number=ec-1.1.1.21}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:20, 18 March 2021

Reaction RXN-8772

  • direction:
    • reversible
  • common-name:
    • l-arabinose reductase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5515, L-arabinose degradation II:
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR107158
  • RHEA:
  • LIGAND-RXN: