Difference between revisions of "RXN-8773"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN-11750 == * direction: ** left-to-right * common-name: ** very-long-chain 3-hydroxyacyl-coa dehydratase * ec-number: ** [http://enzyme.exp...")
(Created page with "Category:reaction == Reaction RXN-8773 == * direction: ** reversible * common-name: ** d-xylose reductase * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.21 ec-1.1.1.21...")
 
(5 intermediate revisions by 2 users not shown)
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-11750 ==
+
== Reaction RXN-8773 ==
 
* direction:
 
* direction:
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
** very-long-chain 3-hydroxyacyl-coa dehydratase
+
** d-xylose reductase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/4.2.1.134 ec-4.2.1.134]
+
** [http://enzyme.expasy.org/EC/1.1.1.21 ec-1.1.1.21]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[Very-Long-Chain-3-Hydroxyacyl-CoAs]][c] '''=>''' 1 [[Very-Long-Chain-Trans-23-Dehydroacyl-CoA]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[NADP]][c] '''+''' 1 [[XYLITOL]][c] '''<=>''' 1 [[D-Xylopyranose]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ00783]]
+
* Gene: [[SJ05644]]
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ06882]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-5080]], very long chain fatty acid biosynthesis I:
+
* [[PWY-5516]], D-xylose degradation II:
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR105261
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=45813 45813]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27448 27448]
{{#set: direction=left-to-right}}
+
* LIGAND-RXN:
{{#set: common-name=very-long-chain 3-hydroxyacyl-coa dehydratase}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01431 R01431]
{{#set: ec-number=ec-4.2.1.134}}
+
{{#set: direction=reversible}}
{{#set: nb gene associated=2}}
+
{{#set: common-name=d-xylose reductase}}
 +
{{#set: ec-number=ec-1.1.1.21}}
 +
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction RXN-8773

  • direction:
    • reversible
  • common-name:
    • d-xylose reductase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5516, D-xylose degradation II:
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR105261
  • RHEA:
  • LIGAND-RXN: