Difference between revisions of "RXN-8789"

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(Created page with "Category:reaction == Reaction RXN-13404 == * direction: ** left-to-right * common-name: ** sarcosine n-methyltransferase * ec-number: ** [http://enzyme.expasy.org/EC/2.1.1...")
(Created page with "Category:reaction == Reaction ExchangeSeed-CA+2 == * direction: ** reversible == Reaction formula == * 1.0 CA+2[C-BOUNDARY] '''<=>''' 1.0 CA+2[e] == Gene(s) associ...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-13404 ==
+
== Reaction ExchangeSeed-CA+2 ==
 
* direction:
 
* direction:
** left-to-right
+
** reversible
* common-name:
 
** sarcosine n-methyltransferase
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/2.1.1.156 ec-2.1.1.156]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[GLY]][c] '''+''' 2 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 2 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[DIMETHYL-GLYCINE]][c] '''+''' 2 [[PROTON]][c]
+
* 1.0 [[CA+2]][C-BOUNDARY] '''<=>''' 1.0 [[CA+2]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* Gene: [[SJ12119]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ03081]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ11087]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ02539]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ10116]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ02540]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ12116]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ12118]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ12128]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ18177]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ14716]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
+
{{#set: direction=reversible}}
** [http://www.genome.jp/dbget-bin/www_bget?R10060 R10060]
+
{{#set: nb gene associated=0}}
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32466 32466]
 
{{#set: direction=left-to-right}}
 
{{#set: common-name=sarcosine n-methyltransferase}}
 
{{#set: ec-number=ec-2.1.1.156}}
 
{{#set: nb gene associated=11}}
 
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=manual}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=curation}}
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=import_from_medium}}

Revision as of 19:02, 14 January 2021

Reaction ExchangeSeed-CA+2

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links