Difference between revisions of "RXN-8789"

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(Created page with "Category:reaction == Reaction RXN-8642 == <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> * direction: ** reversible * common-name:...")
(Created page with "Category:reaction == Reaction RXN-8789 == * direction: ** reversible * common-name: ** geranylgeranyl-bacteriochlorophyll a reductase == Reaction formula == * 1 CPD-9089...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction RXN-8642 ==
+
== Reaction RXN-8789 ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 
* common-name:
 
* common-name:
−
** nadp-dependent isocitrate dehydrogenase
+
** geranylgeranyl-bacteriochlorophyll a reductase
−
* synonymous:
 
−
** idp
 
−
** triphosphopyridine nucleotide-linked isocitrate dehydrogenase-oxalosuccinate carboxylase
 
−
** idp1
 
−
** isocitrate (nadp) dehydrogenase
 
−
** nadp+-icdh
 
−
** nadp isocitric dehydrogenase
 
−
** idp2
 
−
** nadp+-linked isocitrate dehydrogenase
 
−
** nadp-linked isocitrate dehydrogenase
 
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** isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase
 
−
** nadp-specific isocitrate dehydrogenase
 
−
** nadp-dependent isocitric dehydrogenase
 
−
** dual-cofactor-specific isocitrate dehydrogenase
 
−
** idh (ambiguous)
 
−
** isocitrate dehydrogenase (nadp-dependent)
 
−
** idp3
 
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** nadp+-idh
 
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** oxalsuccinic decarboxylase
 
−
</div>
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[OXALO-SUCCINATE]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
* 1 [[CPD-9089]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[CPD-9088]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ08749]]
+
* Gene: [[SJ15264]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-5526]], bacteriochlorophyll a biosynthesis:
 +
** '''5''' reactions found over '''13''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* METANETX-RXN : MNXR122485
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19384 19384]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00268 R00268]
 
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
−
{{#set: common-name=nadp-dependent isocitrate dehydrogenase}}
+
{{#set: common-name=geranylgeranyl-bacteriochlorophyll a reductase}}
−
{{#set: synonymous=nadp-linked isocitrate dehydrogenase|nadp-dependent isocitric dehydrogenase|idp2|nadp-specific isocitrate dehydrogenase|nadp+-icdh|idp|nadp+-idh|nadp isocitric dehydrogenase|idp1|isocitrate (nadp) dehydrogenase|isocitrate dehydrogenase (nadp-dependent)|idp3|nadp+-linked isocitrate dehydrogenase|isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase|triphosphopyridine nucleotide-linked isocitrate dehydrogenase-oxalosuccinate carboxylase|dual-cofactor-specific isocitrate dehydrogenase|idh (ambiguous)|oxalsuccinic decarboxylase}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction RXN-8789

  • direction:
    • reversible
  • common-name:
    • geranylgeranyl-bacteriochlorophyll a reductase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5526, bacteriochlorophyll a biosynthesis:
    • 5 reactions found over 13 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR122485





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