Difference between revisions of "RXN-8789"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-901 RXN0-901] == * direction: ** reversible * common-name: ** xanthine:nad+ oxidoreductase * e...")
(Created page with "Category:reaction == Reaction RXN-8789 == * direction: ** reversible * common-name: ** geranylgeranyl-bacteriochlorophyll a reductase == Reaction formula == * 1 CPD-9089...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-901 RXN0-901] ==
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== Reaction RXN-8789 ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 
* common-name:
 
* common-name:
** xanthine:nad+ oxidoreductase
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** geranylgeranyl-bacteriochlorophyll a reductase
* ec-number:
 
** [http://enzyme.expasy.org/EC/1.17.1.4 ec-1.17.1.4]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[XANTHINE]][c] '''<=>''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[URATE]][c]
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* 1 [[CPD-9089]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[CPD-9088]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* Gene: [[SJ15264]]
* Gene: [[SJ13098]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
** Category: [[orthology]]
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ13101]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ05673]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ05660]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ05674]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ13100]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ05668]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ13095]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[PWY-5526]], bacteriochlorophyll a biosynthesis:
* [[PWY-5497]], purine nucleobases degradation II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5497 PWY-5497]
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** '''5''' reactions found over '''13''' reactions in the full pathway
** '''10''' reactions found over '''24''' reactions in the full pathway
 
* [[P164-PWY]], purine nucleobases degradation I (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=P164-PWY P164-PWY]
 
** '''6''' reactions found over '''17''' reactions in the full pathway
 
* [[PWY-6596]], adenosine nucleotides degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6596 PWY-6596]
 
** '''7''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-6606]], guanosine nucleotides degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6606 PWY-6606]
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-6607]], guanosine nucleotides degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6607 PWY-6607]
 
** '''3''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-6999]], theophylline degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6999 PWY-6999]
 
** '''2''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-6608]], guanosine nucleotides degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6608 PWY-6608]
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-6538]], caffeine degradation III (bacteria, via demethylation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6538 PWY-6538]
 
** '''2''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-5695]], inosine 5'-phosphate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5695 PWY-5695]
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
* [[SALVADEHYPOX-PWY]], adenosine nucleotides degradation II: [http://metacyc.org/META/NEW-IMAGE?object=SALVADEHYPOX-PWY SALVADEHYPOX-PWY]
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
</div>
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
* RHEA:
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* METANETX-RXN : MNXR122485
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16672 16672]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R02103 R02103]
 
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/Q62637 Q62637]
 
** [http://www.uniprot.org/uniprot/P22811 P22811]
 
** [http://www.uniprot.org/uniprot/Q12553 Q12553]
 
** [http://www.uniprot.org/uniprot/P08793 P08793]
 
** [http://www.uniprot.org/uniprot/P10351 P10351]
 
** [http://www.uniprot.org/uniprot/Q7M0I7 Q7M0I7]
 
** [http://www.uniprot.org/uniprot/Q7M0I8 Q7M0I8]
 
** [http://www.uniprot.org/uniprot/Q7M0I9 Q7M0I9]
 
** [http://www.uniprot.org/uniprot/P47990 P47990]
 
** [http://www.uniprot.org/uniprot/P47989 P47989]
 
** [http://www.uniprot.org/uniprot/Q00519 Q00519]
 
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
{{#set: common-name=xanthine:nad+ oxidoreductase}}
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{{#set: common-name=geranylgeranyl-bacteriochlorophyll a reductase}}
{{#set: ec-number=ec-1.17.1.4}}
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{{#set: nb gene associated=1}}
{{#set: nb gene associated=8}}
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{{#set: nb pathway associated=1}}
{{#set: nb pathway associated=10}}
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{{#set: reconstruction category=annotation}}
{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction tool=pathwaytools}}
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome|output_pantograph_arabidopsis_thaliana}}
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{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction RXN-8789

  • direction:
    • reversible
  • common-name:
    • geranylgeranyl-bacteriochlorophyll a reductase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5526, bacteriochlorophyll a biosynthesis:
    • 5 reactions found over 13 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR122485