Difference between revisions of "RXN-8988"
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(Created page with "Category:reaction == Reaction RXN-14171 == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.302 ec-1.1.1.302] == Reaction formula == * 1 CPD...") |
(Created page with "Category:reaction == Reaction RXN-8988 == * direction: ** left-to-right * common-name: ** itaconyl-coa synthetase * ec-number: ** [http://enzyme.expasy.org/EC/6.2.1.4 ec-6...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN- | + | == Reaction RXN-8988 == |
* direction: | * direction: | ||
− | ** | + | ** left-to-right |
+ | * common-name: | ||
+ | ** itaconyl-coa synthetase | ||
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/6.2.1.4 ec-6.2.1.4] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[CO-A]][c] '''+''' 1 [[GTP]][c] '''+''' 1 [[ITACONATE]][c] '''=>''' 1 [[CPD-1137]][c] '''+''' 1 [[GDP]][c] '''+''' 1 [[Pi]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ03269]] |
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ21782]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
+ | * [[PWY-5749]], itaconate degradation: | ||
+ | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
+ | * METANETX-RXN : MNXR100883 | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R02405 R02405] |
− | + | {{#set: direction=left-to-right}} | |
− | + | {{#set: common-name=itaconyl-coa synthetase}} | |
− | {{#set: | + | {{#set: ec-number=ec-6.2.1.4}} |
− | {{#set: ec-number=ec- | + | {{#set: nb gene associated=2}} |
− | {{#set: nb gene associated= | + | {{#set: nb pathway associated=1}} |
− | {{#set: nb pathway associated= | + | {{#set: reconstruction category=orthology|annotation}} |
− | {{#set: reconstruction category=annotation}} | + | {{#set: reconstruction tool=pathwaytools|pantograph}} |
− | {{#set: reconstruction tool=pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}} |
Latest revision as of 11:23, 18 March 2021
Contents
Reaction RXN-8988
- direction:
- left-to-right
- common-name:
- itaconyl-coa synthetase
- ec-number:
Reaction formula
Gene(s) associated with this reaction
- Gene: SJ03269
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ21782
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-5749, itaconate degradation:
- 1 reactions found over 4 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
- METANETX-RXN : MNXR100883
- LIGAND-RXN: