Difference between revisions of "RXN-8991"

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(Created page with "Category:reaction == Reaction RXN-14971 == * direction: ** left-to-right * common-name: ** succinate dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.3.5.1 ec-...")
(Created page with "Category:reaction == Reaction RXN-17795 == * direction: ** left-to-right * common-name: ** acetyl-coa c-acyltransferase ** 3-ketoacyl-coa thiolase * ec-number: ** [http://...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-14971 ==
+
== Reaction RXN-17795 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** succinate dehydrogenase
+
** acetyl-coa c-acyltransferase
 +
** 3-ketoacyl-coa thiolase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.3.5.1 ec-1.3.5.1]
+
** [http://enzyme.expasy.org/EC/2.3.1.16 ec-2.3.1.16]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ETR-Quinones]][c] '''+''' 1 [[SUC]][c] '''=>''' 1 [[ETR-Quinols]][c] '''+''' 1 [[FUM]][c]
+
* 1 [[CO-A]][c] '''+''' 1 [[CPD-19157]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[CPD-19148]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ21818]]
−
* Gene: [[SJ18770]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ19480]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ02694]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ17484]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ01012]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ14898]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
−
* Gene: [[SJ02118]]
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ21817]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ16470]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ09371]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6969]], TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase):
 
−
** '''10''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-5690]], TCA cycle II (plants and fungi):
 
−
** '''8''' reactions found over '''9''' reactions in the full pathway
 
−
* [[P105-PWY]], TCA cycle IV (2-oxoglutarate decarboxylase):
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[TCA]], TCA cycle I (prokaryotic):
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-7254]], TCA cycle VII (acetate-producers):
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-561]], superpathway of glyoxylate cycle and fatty acid degradation:
 
−
** '''6''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6728]], methylaspartate cycle:
 
−
** '''11''' reactions found over '''19''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* METANETX-RXN : MNXR121170
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=40524 40524]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=succinate dehydrogenase}}
+
{{#set: common-name=acetyl-coa c-acyltransferase|3-ketoacyl-coa thiolase}}
−
{{#set: ec-number=ec-1.3.5.1}}
+
{{#set: ec-number=ec-2.3.1.16}}
−
{{#set: nb gene associated=6}}
+
{{#set: nb gene associated=5}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 08:37, 15 March 2021

Reaction RXN-17795

  • direction:
    • left-to-right
  • common-name:
    • acetyl-coa c-acyltransferase
    • 3-ketoacyl-coa thiolase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR121170





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