Difference between revisions of "RXN-8991"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7587 PWY-7587] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-1117 tax-11...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.8.2.23-RXN 2.8.2.23-RXN] == * direction: ** left-to-right * common-name: ** [heparan sulfate]-glu...")
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7587 PWY-7587] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.8.2.23-RXN 2.8.2.23-RXN] ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-1117 tax-1117]
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** left-to-right
 
* common-name:
 
* common-name:
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** oleate biosynthesis iii (cyanobacteria)
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** [heparan sulfate]-glucosamine 3-sulfotransferase 1
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== Reaction(s) found ==
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** [heparan sulfate]-α-d-n-sulfoglucosamine 3-o-sulfotransferase
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* [[RXN-16024]]
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* ec-number:
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* [[RXN-16067]]
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** [http://enzyme.expasy.org/EC/2.8.2.23 ec-2.8.2.23]
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== Reaction(s) not found ==
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== Reaction formula ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16023 RXN-16023]
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* 1 [[Heparan-sulfate-D-GlcNS]][c] '''+''' 1 [[PAPS]][c] '''=>''' 1 [[3-5-ADP]][c] '''+''' 1 [[Heparan-sulfate-3-N-disulfate]][c] '''+''' 1 [[PROTON]][c]
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{{#set: taxonomic-range=tax-1117}}
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== Gene(s) associated with this reaction  ==
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{{#set: common-name=oleate biosynthesis iii (cyanobacteria)}}
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* Gene: [[SJ00944]]
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{{#set: nb reaction found=2}}
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** Category: [[annotation]]
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{{#set: completion rate=0.67}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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{{#set: nb total reaction=3}}
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* Gene: [[SJ17721]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ21424]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ08012]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ20108]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ07694]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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== Pathway(s) ==
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* [[PWY-6558]], heparan sulfate biosynthesis (late stages): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6558 PWY-6558]
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** '''7''' reactions found over '''13''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== External links  ==
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15462 15462]
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{{#set: direction=left-to-right}}
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{{#set: common-name=[heparan sulfate]-glucosamine 3-sulfotransferase 1|[heparan sulfate]-α-d-n-sulfoglucosamine 3-o-sulfotransferase}}
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{{#set: ec-number=ec-2.8.2.23}}
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{{#set: nb gene associated=6}}
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{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 09:33, 27 August 2019

Reaction 2.8.2.23-RXN

  • direction:
    • left-to-right
  • common-name:
    • [heparan sulfate]-glucosamine 3-sulfotransferase 1
    • [heparan sulfate]-α-d-n-sulfoglucosamine 3-o-sulfotransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6558, heparan sulfate biosynthesis (late stages): PWY-6558
    • 7 reactions found over 13 reactions in the full pathway

Reconstruction information

External links

  • Property "Common-name" (as page type) with input value "heparan sulfate]-glucosamine 3-sulfotransferase 1" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
  • Property "Common-name" (as page type) with input value "heparan sulfate]-α-d-n-sulfoglucosamine 3-o-sulfotransferase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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