Difference between revisions of "RXN-9000"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6163 PWY-6163] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-2157 tax-21...")
(Created page with "Category:reaction == Reaction RXN-9000 == * direction: ** left-to-right * common-name: ** glucuronosyltransferase * ec-number: ** [http://enzyme.expasy.org/EC/2.4.1.17 ec-...")
 
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6163 PWY-6163] ==
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== Reaction RXN-9000 ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2157 tax-2157]
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** left-to-right
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-3041 tax-3041]
 
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2763 tax-2763]
 
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-287987 tax-287987]
 
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-5204 tax-5204]
 
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2836 tax-2836]
 
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-4762 tax-4762]
 
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-4890 tax-4890]
 
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-5794 tax-5794]
 
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-33090 tax-33090]
 
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2]
 
 
* common-name:
 
* common-name:
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** chorismate biosynthesis from 3-dehydroquinate
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** glucuronosyltransferase
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== Reaction(s) found ==
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* ec-number:
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* [[2.5.1.19-RXN]]
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** [http://enzyme.expasy.org/EC/2.4.1.17 ec-2.4.1.17]
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* [[3-DEHYDROQUINATE-DEHYDRATASE-RXN]]
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== Reaction formula ==
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* [[CHORISMATE-SYNTHASE-RXN]]
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* 1 [[CPD-9459]][c] '''+''' 1 [[UDP-GLUCURONATE]][c] '''=>''' 1 [[CPD-9460]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c]
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* [[RXN-7968]]
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== Gene(s) associated with this reaction  ==
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* [[SHIKIMATE-5-DEHYDROGENASE-RXN]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[SHIKIMATE-KINASE-RXN]]
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* Gene: [[SJ22626]]
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== Reaction(s) not found ==
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** Category: [[annotation]]
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All reactions of this pathways are in present
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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{{#set: taxonomic-range=tax-287987|tax-4890|tax-3041|tax-2157|tax-5204|tax-33090|tax-2763|tax-4762|tax-2836|tax-5794|tax-2}}
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* Gene: [[SJ07898]]
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{{#set: common-name=chorismate biosynthesis from 3-dehydroquinate}}
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** Category: [[annotation]]
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{{#set: nb reaction found=6}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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{{#set: completion rate=1.2}}
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* Gene: [[SJ01409]]
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{{#set: nb total reaction=5}}
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ07398]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ20720]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ07780]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ11522]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ14184]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ07670]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ01052]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ08296]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ16943]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ07900]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ08300]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ14192]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ22094]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ21933]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ08295]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ22623]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ02722]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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</div>
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== Pathway(s) ==
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* [[PWY-5756]], saponin biosynthesis II:
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** '''1''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== External links  ==
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* METANETX-RXN : MNXR122574
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{{#set: direction=left-to-right}}
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{{#set: common-name=glucuronosyltransferase}}
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{{#set: ec-number=ec-2.4.1.17}}
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{{#set: nb gene associated=20}}
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{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:24, 18 March 2021

Reaction RXN-9000

  • direction:
    • left-to-right
  • common-name:
    • glucuronosyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5756, saponin biosynthesis II:
    • 1 reactions found over 8 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR122574





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