Difference between revisions of "RXN-9003"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.77-RXN 2.1.1.77-RXN] == * direction: ** left-to-right * common-name: ** l-isoaspartate protei...")
 
(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-3 PWY66-3] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-33208 tax-332...")
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[[Category:reaction]]
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[[Category:pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.77-RXN 2.1.1.77-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-3 PWY66-3] ==
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* direction:
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* taxonomic-range:
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** left-to-right
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-33208 tax-33208]
 
* common-name:
 
* common-name:
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** l-isoaspartate protein carboxylmethyltransferase
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** cholesterol biosynthesis ii (via 24,25-dihydrolanosterol)
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** protein-l-isoaspartate (d-aspartate) o-methyltransferase
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== Reaction(s) found ==
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* ec-number:
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* [[1.14.21.6-RXN]]
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** [http://enzyme.expasy.org/EC/2.1.1.77 ec-2.1.1.77]
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* [[RXN66-11]]
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== Reaction formula ==
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* [[RXN66-12]]
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* 1 [[PROTEIN-L-BETA-ISOASPARTATES]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTEIN-L-BETA-ISOSPARTATE-METHYL-ESTERS]][c]
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* [[RXN66-13]]
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== Gene(s) associated with this reaction  ==
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* [[RXN66-14]]
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* Gene: [[SJ06126]]
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* [[RXN66-18]]
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** Category: [[annotation]]
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* [[RXN66-19]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[RXN66-23]]
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** Category: [[orthology]]
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* [[RXN66-24]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [[RXN66-323]]
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* Gene: [[SJ01013]]
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== Reaction(s) not found ==
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-25 RXN66-25]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-16 RXN66-16]
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** Category: [[orthology]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-21 RXN66-21]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-17 RXN66-17]
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== Pathway(s) ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-22 RXN66-22]
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== Reconstruction information  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-15 RXN66-15]
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-20 RXN66-20]
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-10 RXN66-10]
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== External links  ==
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{{#set: taxonomic-range=tax-33208}}
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* RHEA:
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{{#set: common-name=cholesterol biosynthesis ii (via 24,25-dihydrolanosterol)}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12706 12706]
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{{#set: nb reaction found=10}}
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* LIGAND-RXN:
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{{#set: completion rate=0.56}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04190 R04190]
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{{#set: nb total reaction=18}}
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P22062 P22062]
 
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** [http://www.uniprot.org/uniprot/P22061 P22061]
 
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** [http://www.uniprot.org/uniprot/P15246 P15246]
 
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** [http://www.uniprot.org/uniprot/Q9JW29 Q9JW29]
 
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** [http://www.uniprot.org/uniprot/Q9PIR6 Q9PIR6]
 
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** [http://www.uniprot.org/uniprot/P23506 P23506]
 
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** [http://www.uniprot.org/uniprot/P0A7A5 P0A7A5]
 
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** [http://www.uniprot.org/uniprot/Q43209 Q43209]
 
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** [http://www.uniprot.org/uniprot/Q42539 Q42539]
 
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** [http://www.uniprot.org/uniprot/Q27873 Q27873]
 
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** [http://www.uniprot.org/uniprot/Q9URZ1 Q9URZ1]
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=protein-l-isoaspartate (d-aspartate) o-methyltransferase|l-isoaspartate protein carboxylmethyltransferase}}
 
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{{#set: ec-number=ec-2.1.1.77}}
 
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{{#set: nb gene associated=2}}
 
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{{#set: nb pathway associated=0}}
 
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{{#set: reconstruction category=orthology|annotation}}
 
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{{#set: reconstruction tool=pathwaytools|pantograph}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
 

Revision as of 14:29, 26 August 2019

Pathway PWY66-3

  • taxonomic-range:
  • common-name:
    • cholesterol biosynthesis ii (via 24,25-dihydrolanosterol)

Reaction(s) found

Reaction(s) not found



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