Difference between revisions of "RXN-9003"

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(Created page with "Category:reaction == Reaction RXN-11917 == * direction: ** left-to-right * common-name: ** 7-methyl-3-oxo-6-octenoyl-coa:acetyl-coa c-acyltransferase * ec-number: ** [http...")
(Created page with "Category:reaction == Reaction RXN-17351 == * direction: ** left-to-right * common-name: ** hydroquinone:oxygen oxidoreductase * ec-number: ** [http://enzyme.expasy.org/EC/...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-11917 ==
+
== Reaction RXN-17351 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 7-methyl-3-oxo-6-octenoyl-coa:acetyl-coa c-acyltransferase
+
** hydroquinone:oxygen oxidoreductase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1 ec-2.3.1]
+
** [http://enzyme.expasy.org/EC/1.10.3.2 ec-1.10.3.2]
−
* synonymous:
 
−
** 7-methyl-3-oxo-6-octenoyl-coa thiolase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CO-A]][c] '''+''' 1 [[CPD-12897]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[CPD-12902]][c]
+
* 4 [[CONIFERYL-ALCOHOL]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 4 [[CPD-18761]][c] '''+''' 2 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ21818]]
+
* Gene: [[SJ20486]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ09371]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6672]], cis-genanyl-CoA degradation:
+
* [[PWY-5466]], matairesinol biosynthesis:
−
** '''4''' reactions found over '''9''' reactions in the full pathway
+
** '''2''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-6824]], justicidin B biosynthesis:
 +
** '''2''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-5469]], sesamin biosynthesis:
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R08091 R08091]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=7-methyl-3-oxo-6-octenoyl-coa:acetyl-coa c-acyltransferase}}
+
{{#set: common-name=hydroquinone:oxygen oxidoreductase}}
−
{{#set: ec-number=ec-2.3.1}}
+
{{#set: ec-number=ec-1.10.3.2}}
−
{{#set: synonymous=7-methyl-3-oxo-6-octenoyl-coa thiolase}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb pathway associated=3}}
−
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction tool=pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 13:17, 14 January 2021

Reaction RXN-17351

  • direction:
    • left-to-right
  • common-name:
    • hydroquinone:oxygen oxidoreductase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5466, matairesinol biosynthesis:
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-6824, justicidin B biosynthesis:
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5469, sesamin biosynthesis:
    • 2 reactions found over 8 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-9003&oldid=89665"