Difference between revisions of "RXN-905"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction URA-PHOSPH-RXN == * direction: ** reversible * common-name: ** uracil phosphorylase * ec-number: ** [http://enzyme.expasy.org/EC/2.4.2.3 ec-2...")
(Created page with "Category:reaction == Reaction ARYLFORMAMIDASE-RXN == * direction: ** left-to-right * common-name: ** kynurenine formamidase * ec-number: ** [http://enzyme.expasy.org/EC/3....")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction URA-PHOSPH-RXN ==
+
== Reaction ARYLFORMAMIDASE-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** uracil phosphorylase
+
** kynurenine formamidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.2.3 ec-2.4.2.3]
+
** [http://enzyme.expasy.org/EC/3.5.1.9 ec-3.5.1.9]
−
** [http://enzyme.expasy.org/EC/2.4.2.2 ec-2.4.2.2]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[DEOXYURIDINE]][c] '''+''' 1 [[Pi]][c] '''<=>''' 1 [[DEOXY-D-RIBOSE-1-PHOSPHATE]][c] '''+''' 1 [[URACIL]][c]
+
* 1 [[N-FORMYLKYNURENINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-14736]][c] '''+''' 1 [[FORMATE]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ03195]]
+
* Gene: [[SJ22183]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7181]], pyrimidine deoxyribonucleosides degradation:
+
* [[PWY-7717]], 3-hydroxy-4-methyl-anthranilate biosynthesis I:
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[TRPCAT-PWY]], L-tryptophan degradation I (via anthranilate):
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5651]], L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde:
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7765]], 3-hydroxy-4-methyl-anthranilate biosynthesis II:
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6309]], L-tryptophan degradation XI (mammalian, via kynurenine):
 +
** '''7''' reactions found over '''11''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22827 22827]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13010 13010]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02484 R02484]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01959 R01959]
−
{{#set: direction=reversible}}
+
{{#set: direction=left-to-right}}
−
{{#set: common-name=uracil phosphorylase}}
+
{{#set: common-name=kynurenine formamidase}}
−
{{#set: ec-number=ec-2.4.2.2|ec-2.4.2.3}}
+
{{#set: ec-number=ec-3.5.1.9}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=5}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 11:25, 15 January 2021

Reaction ARYLFORMAMIDASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • kynurenine formamidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7717, 3-hydroxy-4-methyl-anthranilate biosynthesis I:
    • 3 reactions found over 6 reactions in the full pathway
  • TRPCAT-PWY, L-tryptophan degradation I (via anthranilate):
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5651, L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde:
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-7765, 3-hydroxy-4-methyl-anthranilate biosynthesis II:
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-6309, L-tryptophan degradation XI (mammalian, via kynurenine):
    • 7 reactions found over 11 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-905&oldid=116299"