Difference between revisions of "RXN-9104"

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(Created page with "Category:reaction == Reaction RXN-7985 == * direction: ** left-to-right * common-name: ** violaxanthin de-epoxidase ** antheraxanthin de-epoxidase * synonymous: ** vde ==...")
(Created page with "Category:reaction == Reaction RXN-15268 == * direction: ** reversible * common-name: ** alpha-(1,3)-fucosyltransferase, family gt10 == Reaction formula == * 1.0 BETA-D-G...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-7985 ==
+
== Reaction RXN-15268 ==
 
* direction:
 
* direction:
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
** violaxanthin de-epoxidase
+
** alpha-(1,3)-fucosyltransferase, family gt10
** antheraxanthin de-epoxidase
 
* synonymous:
 
** vde
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[ASCORBATE]][c] '''+''' 1 [[CPD1F-131]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD1F-130]][c] '''+''' 1 [[L-DEHYDRO-ASCORBATE]][c] '''+''' 1 [[WATER]][c]
+
* 1.0 [[BETA-D-GALACTOSYL-ETCETERA-GLUCOSAMINE]][c] '''+''' 1.0 [[GUANOSINE_DIPHOSPHATE_FUCOSE]][c] '''<=>''' 1.0 [[CPD-16475]][c] '''+''' 1.0 [[GDP]][c] '''+''' 1.0 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ19927]]
+
* Gene: [[SJ06688]]
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
* Gene: [[SJ03764]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ20456]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-5945]], violaxanthin, antheraxanthin and zeaxanthin interconversion:
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
* RHEA:
+
{{#set: direction=reversible}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21801 21801]
+
{{#set: common-name=alpha-(1,3)-fucosyltransferase, family gt10}}
* LIGAND-RXN:
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{{#set: nb gene associated=1}}
** [http://www.genome.jp/dbget-bin/www_bget?R07179 R07179]
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{{#set: nb pathway associated=0}}
{{#set: direction=left-to-right}}
+
{{#set: reconstruction category=orthology}}
{{#set: common-name=antheraxanthin de-epoxidase|violaxanthin de-epoxidase}}
+
{{#set: reconstruction tool=pantograph}}
{{#set: synonymous=vde}}
 
{{#set: nb gene associated=3}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_nannochloropsis_salina}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:03, 5 January 2021

Reaction RXN-15268

  • direction:
    • reversible
  • common-name:
    • alpha-(1,3)-fucosyltransferase, family gt10

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links