Difference between revisions of "RXN-9225"

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(Created page with "Category:reaction == Reaction STRICTOSIDINE-SYNTHASE-RXN == * direction: ** left-to-right * common-name: ** strictosidine synthase * ec-number: ** [http://enzyme.expasy.or...")
(Created page with "Category:reaction == Reaction RXN-9225 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.1.1.222 ec-2.1.1.222] == Reaction formula == * 1 C...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction STRICTOSIDINE-SYNTHASE-RXN ==
+
== Reaction RXN-9225 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** strictosidine synthase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.3.3.2 ec-4.3.3.2]
+
** [http://enzyme.expasy.org/EC/2.1.1.222 ec-2.1.1.222]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[SECOLOGANIN-CPD]][c] '''+''' 1 [[TRYPTAMINE]][c] '''=>''' 1 [[STRICTOSIDINE]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[CPD-9854]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[CPD-9857]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ12255]]
+
* Gene: [[SJ16864]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ13007]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5290]], secologanin and strictosidine biosynthesis:
+
* [[PWY-5855]], ubiquinol-7 biosynthesis (early decarboxylation):
−
** '''2''' reactions found over '''17''' reactions in the full pathway
+
** '''3''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-6326]], camptothecin biosynthesis:
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR108386
+
* METANETX-RXN : MNXR122717
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15013 15013]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=44593 44593]
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03738 R03738]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q9VAQ9 Q9VAQ9]
 
−
** [http://www.uniprot.org/uniprot/P68175 P68175]
 
−
** [http://www.uniprot.org/uniprot/P18417 P18417]
 
−
** [http://www.uniprot.org/uniprot/P68174 P68174]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=strictosidine synthase}}
+
{{#set: ec-number=ec-2.1.1.222}}
−
{{#set: ec-number=ec-4.3.3.2}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb pathway associated=1}}
−
{{#set: nb pathway associated=2}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction RXN-9225

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5855, ubiquinol-7 biosynthesis (early decarboxylation):
    • 3 reactions found over 8 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR122717
  • RHEA:





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