Difference between revisions of "RXN-9233"

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(Created page with "Category:reaction == Reaction RXN3O-5304 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1 ec-2.3.1] ** [http://enzyme.expasy.org/EC/2.3....")
(Created page with "Category:reaction == Reaction RXN-11750 == * direction: ** left-to-right * common-name: ** very-long-chain 3-hydroxyacyl-coa dehydratase * ec-number: ** [http://enzyme.exp...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN3O-5304 ==
+
== Reaction RXN-11750 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** very-long-chain 3-hydroxyacyl-coa dehydratase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1 ec-2.3.1]
+
** [http://enzyme.expasy.org/EC/4.2.1.134 ec-4.2.1.134]
−
** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CO-A]][c] '''+''' 1 [[Stearoyl-ACPs]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[STEAROYL-COA]][c]
+
* 1 [[Very-Long-Chain-3-Hydroxyacyl-CoAs]][c] '''=>''' 1 [[Very-Long-Chain-Trans-23-Dehydroacyl-CoA]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[SJ00783]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ06882]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY3O-355]], stearate biosynthesis III (fungi):
+
* [[PWY-5080]], very long chain fatty acid biosynthesis I:
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=45813 45813]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-2.3.1|ec-2.3.1.86}}
+
{{#set: common-name=very-long-chain 3-hydroxyacyl-coa dehydratase}}
−
{{#set: nb gene associated=0}}
+
{{#set: ec-number=ec-4.2.1.134}}
 +
{{#set: nb gene associated=2}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction comment=added for gapfilling}}
+
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 11:24, 15 January 2021

Reaction RXN-11750

  • direction:
    • left-to-right
  • common-name:
    • very-long-chain 3-hydroxyacyl-coa dehydratase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5080, very long chain fatty acid biosynthesis I:
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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