Difference between revisions of "RXN-9240"
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(Created page with "Category:reaction == Reaction ADPART == * direction: ** left-to-right * common-name: ** 1-(5-phospho-d-ribosyl)-atp:diphosphate phospho-alpha-d-ribosyl-transferase == Reac...") |
(Created page with "Category:reaction == Reaction SEDOHEPTULOSE-BISPHOSPHATASE-RXN == * direction: ** left-to-right * common-name: ** sedoheptulose bisphosphatase ** sedoheptulose-bisphosphat...") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction SEDOHEPTULOSE-BISPHOSPHATASE-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
− | ** | + | ** sedoheptulose bisphosphatase |
+ | ** sedoheptulose-bisphosphatase | ||
+ | * ec-number: | ||
+ | ** [http://enzyme.expasy.org/EC/3.1.3.37 ec-3.1.3.37] | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 | + | * 1 [[D-SEDOHEPTULOSE-1-7-P2]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[D-SEDOHEPTULOSE-7-P]][c] '''+''' 1 [[Pi]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ10463]] |
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ17320]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
− | *** Source: [[ | + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
+ | * Gene: [[SJ16950]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
+ | * [[CALVIN-PWY]], Calvin-Benson-Bassham cycle: | ||
+ | ** '''12''' reactions found over '''13''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
− | * category: [[orthology]]; source: [[ | + | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a |
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17462 17462] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R01845 R01845] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P23014 P23014] | ||
+ | ** [http://www.uniprot.org/uniprot/P46285 P46285] | ||
+ | ** [http://www.uniprot.org/uniprot/P46283 P46283] | ||
+ | ** [http://www.uniprot.org/uniprot/P46284 P46284] | ||
+ | ** [http://www.uniprot.org/uniprot/O23780 O23780] | ||
+ | ** [http://www.uniprot.org/uniprot/O20252 O20252] | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: common-name= | + | {{#set: common-name=sedoheptulose bisphosphatase|sedoheptulose-bisphosphatase}} |
− | {{#set: nb gene associated= | + | {{#set: ec-number=ec-3.1.3.37}} |
− | {{#set: nb pathway associated= | + | {{#set: nb gene associated=3}} |
− | {{#set: reconstruction category=orthology}} | + | {{#set: nb pathway associated=1}} |
− | {{#set: reconstruction tool=pantograph}} | + | {{#set: reconstruction category=annotation|orthology}} |
+ | {{#set: reconstruction tool=pathwaytools|pantograph}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source= | + | {{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 13:14, 14 January 2021
Contents
Reaction SEDOHEPTULOSE-BISPHOSPHATASE-RXN
- direction:
- left-to-right
- common-name:
- sedoheptulose bisphosphatase
- sedoheptulose-bisphosphatase
- ec-number:
Reaction formula
- 1 D-SEDOHEPTULOSE-1-7-P2[c] + 1 WATER[c] => 1 D-SEDOHEPTULOSE-7-P[c] + 1 Pi[c]
Gene(s) associated with this reaction
- Gene: SJ10463
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ17320
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ16950
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
Pathway(s)
- CALVIN-PWY, Calvin-Benson-Bassham cycle:
- 12 reactions found over 13 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links