Difference between revisions of "RXN-9242"

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(Created page with "Category:reaction == Reaction GLUTKIN-RXN == * direction: ** left-to-right * common-name: ** glutamate 5-kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.2.11 ec-2....")
(Created page with "Category:reaction == Reaction RXN-9242 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.1.1.201 ec-2.1.1.201] == Reaction formula == * 1 C...")
 
(One intermediate revision by the same user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GLUTKIN-RXN ==
+
== Reaction RXN-9242 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** glutamate 5-kinase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.2.11 ec-2.7.2.11]
+
** [http://enzyme.expasy.org/EC/2.1.1.201 ec-2.1.1.201]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[GLT]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[L-GLUTAMATE-5-P]][c]
+
* 1 [[CPD-9870]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[CPD-9872]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ02923]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ20751]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ02842]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ06433]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ00609]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
−
* Gene: [[SJ22406]]
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ11757]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ07072]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ02693]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ11297]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ09366]]
+
</div>
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6922]], L-N&delta;-acetylornithine biosynthesis:
+
* [[PWY-5871]], ubiquinol-9 biosynthesis (late decarboxylation):
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
** '''3''' reactions found over '''8''' reactions in the full pathway
−
* [[ARGININE-SYN4-PWY]], L-ornithine biosynthesis II:
+
* [[PWY-5856]], ubiquinol-9 biosynthesis (early decarboxylation):
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''3''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-3341]], L-proline biosynthesis III (from L-ornithine):
 
−
** '''4''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PROSYN-PWY]], L-proline biosynthesis I (from L-glutamate):
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[CITRULBIO-PWY]], L-citrulline biosynthesis:
 
−
** '''7''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR122735
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14878 14878]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=44761 44761]
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00239 R00239]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q9PJ29 Q9PJ29]
 
−
** [http://www.uniprot.org/uniprot/Q9CF72 Q9CF72]
 
−
** [http://www.uniprot.org/uniprot/Q9JUK7 Q9JUK7]
 
−
** [http://www.uniprot.org/uniprot/P43763 P43763]
 
−
** [http://www.uniprot.org/uniprot/P0A7B5 P0A7B5]
 
−
** [http://www.uniprot.org/uniprot/P17856 P17856]
 
−
** [http://www.uniprot.org/uniprot/P32264 P32264]
 
−
** [http://www.uniprot.org/uniprot/P73071 P73071]
 
−
** [http://www.uniprot.org/uniprot/O04226 O04226]
 
−
** [http://www.uniprot.org/uniprot/O13810 O13810]
 
−
** [http://www.uniprot.org/uniprot/P46546 P46546]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=glutamate 5-kinase}}
+
{{#set: ec-number=ec-2.1.1.201}}
−
{{#set: ec-number=ec-2.7.2.11}}
+
{{#set: nb gene associated=7}}
−
{{#set: nb gene associated=4}}
+
{{#set: nb pathway associated=2}}
−
{{#set: nb pathway associated=5}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:22, 18 March 2021

Reaction RXN-9242

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5871, ubiquinol-9 biosynthesis (late decarboxylation):
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-5856, ubiquinol-9 biosynthesis (early decarboxylation):
    • 3 reactions found over 8 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR122735
  • RHEA:





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