Difference between revisions of "RXN-9362"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ENOYL-COA-DELTA-ISOM-RXN ENOYL-COA-DELTA-ISOM-RXN] == * direction: ** reversible * common-name: **...")
 
(Created page with "Category:reaction == Reaction RXN-9362 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.1.1.163 ec-2.1.1.163] == Reaction formula == * 1 C...")
 
(9 intermediate revisions by 4 users not shown)
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ENOYL-COA-DELTA-ISOM-RXN ENOYL-COA-DELTA-ISOM-RXN] ==
+
== Reaction RXN-9362 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
−
* common-name:
 
−
** δ3-cis-δ2-trans-enoyl-coa isomerase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/5.3.3.8 ec-5.3.3.8]
+
** [http://enzyme.expasy.org/EC/2.1.1.163 ec-2.1.1.163]
−
* synonymous:
 
−
** probable enoyl coa-hydratase/isomerase
 
−
** probable enoyl-coa hydratase/isomerase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CIS-DELTA3-ENOYL-COA]][c] '''<=>''' 1 [[TRANS-D2-ENOYL-COA]][c]
+
* 1 [[CPD-12120]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[CPD-12128]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ22166]]
+
* Gene: [[SJ20751]]
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ07211]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ11169]]
+
* Gene: [[SJ02842]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ00609]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ02693]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ11757]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ07072]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5137]], fatty acid &beta;-oxidation III (unsaturated, odd number): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5137 PWY-5137]
+
* [[PWY-5891]], menaquinol-11 biosynthesis:
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[FAO-PWY]], fatty acid &beta;-oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=FAO-PWY FAO-PWY]
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
+
* METANETX-RXN : MNXR122778
−
** [http://www.uniprot.org/uniprot/P21177 P21177]
+
* RHEA:
−
** [http://www.uniprot.org/uniprot/P42126 P42126]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=44789 44789]
−
** [http://www.uniprot.org/uniprot/P07896 P07896]
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/P23965 P23965]
+
{{#set: ec-number=ec-2.1.1.163}}
−
** [http://www.uniprot.org/uniprot/Q64592 Q64592]
+
{{#set: nb gene associated=6}}
−
** [http://www.uniprot.org/uniprot/Q7M0E0 Q7M0E0]
+
{{#set: nb pathway associated=1}}
−
** [http://www.uniprot.org/uniprot/P42125 P42125]
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/Q39659 Q39659]
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=&delta;3-cis-&delta;2-trans-enoyl-coa isomerase}}
 
−
{{#set: ec-number=ec-5.3.3.8}}
 
−
{{#set: synonymous=probable enoyl coa-hydratase/isomerase|probable enoyl-coa hydratase/isomerase}}
 
−
{{#set: nb gene associated=3}}
 
−
{{#set: nb pathway associated=2}}
 
−
{{#set: reconstruction category=orthology|annotation}}
 
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction RXN-9362

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5891, menaquinol-11 biosynthesis:
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR122778
  • RHEA:





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-9362&oldid=141358"