Difference between revisions of "RXN-9366"

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(Created page with "Category:reaction == Reaction ExchangeSeed-CPD-3 == * direction: ** reversible == Reaction formula == * 1.0 CPD-3[C-BOUNDARY] '''<=>''' 1.0 CPD-3[e] == Gene(s) ass...")
(Created page with "Category:reaction == Reaction DTDPDEHYRHAMREDUCT-RXN == * direction: ** left-to-right * common-name: ** dtdp-4-dehydrorhamnose reductase * ec-number: ** [http://enzyme.exp...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction ExchangeSeed-CPD-3 ==
+
== Reaction DTDPDEHYRHAMREDUCT-RXN ==
 
* direction:
 
* direction:
** reversible
+
** left-to-right
 +
* common-name:
 +
** dtdp-4-dehydrorhamnose reductase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/1.1.1.133 ec-1.1.1.133]
 
== Reaction formula ==
 
== Reaction formula ==
* 1.0 [[CPD-3]][C-BOUNDARY] '''<=>''' 1.0 [[CPD-3]][e]
+
* 1 [[DTDP-DEOH-DEOXY-MANNOSE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[DTDP-RHAMNOSE]][c] '''+''' 1 [[NADP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[SJ22556]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[DTDPRHAMSYN-PWY]], dTDP-L-rhamnose biosynthesis:
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
{{#set: direction=reversible}}
+
* RHEA:
{{#set: nb gene associated=0}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21796 21796]
{{#set: nb pathway associated=0}}
+
* LIGAND-RXN:
{{#set: reconstruction category=manual}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R02777 R02777]
{{#set: reconstruction tool=curation}}
+
* UNIPROT:
{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
+
** [http://www.uniprot.org/uniprot/Q9JV74 Q9JV74]
{{#set: reconstruction source=import_from_medium}}
+
** [http://www.uniprot.org/uniprot/P37760 P37760]
 +
** [http://www.uniprot.org/uniprot/Q46769 Q46769]
 +
** [http://www.uniprot.org/uniprot/O33664 O33664]
 +
** [http://www.uniprot.org/uniprot/O66251 O66251]
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=dtdp-4-dehydrorhamnose reductase}}
 +
{{#set: ec-number=ec-1.1.1.133}}
 +
{{#set: nb gene associated=1}}
 +
{{#set: nb pathway associated=1}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 19:04, 14 January 2021

Reaction DTDPDEHYRHAMREDUCT-RXN

  • direction:
    • left-to-right
  • common-name:
    • dtdp-4-dehydrorhamnose reductase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • DTDPRHAMSYN-PWY, dTDP-L-rhamnose biosynthesis:
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links