Difference between revisions of "RXN-9463"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACSERLY-RXN ACSERLY-RXN] == * direction: ** reversible * common-name: ** o-acetylserine sulfhydryla...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NAPHTHOATE-SYN-RXN NAPHTHOATE-SYN-RXN] == * direction: ** left-to-right * common-name: ** 1,4-dihyd...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACSERLY-RXN ACSERLY-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NAPHTHOATE-SYN-RXN NAPHTHOATE-SYN-RXN] ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** o-acetylserine sulfhydrylase
+
** 1,4-dihydroxy-2-naphthoyl-coa synthase
−
** cysteine synthase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.5.1.47 ec-2.5.1.47]
+
** [http://enzyme.expasy.org/EC/4.1.3.36 ec-4.1.3.36]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ACETYLSERINE]][c] '''+''' 1 [[HS]][c] '''<=>''' 1 [[ACET]][c] '''+''' 1 [[CYS]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[CPD-6972]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-9925]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ16706]]
+
* Gene: [[SJ04418]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ15937]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ01657]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[CYSTSYN-PWY]], L-cysteine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=CYSTSYN-PWY CYSTSYN-PWY]
+
* [[PWY-5837]], 2-carboxy-1,4-naphthoquinol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5837 PWY-5837]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''4''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14832 14832]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26563 26563]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00897 R00897]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07263 R07263]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P31300 P31300]
+
** [http://www.uniprot.org/uniprot/Q9CHK2 Q9CHK2]
−
** [http://www.uniprot.org/uniprot/Q43153 Q43153]
+
** [http://www.uniprot.org/uniprot/P44960 P44960]
−
** [http://www.uniprot.org/uniprot/O67507 O67507]
+
** [http://www.uniprot.org/uniprot/P0ABU0 P0ABU0]
−
** [http://www.uniprot.org/uniprot/P47998 P47998]
+
** [http://www.uniprot.org/uniprot/P23966 P23966]
−
** [http://www.uniprot.org/uniprot/Q9V1Q3 Q9V1Q3]
+
** [http://www.uniprot.org/uniprot/Q59464 Q59464]
−
** [http://www.uniprot.org/uniprot/Q9RW80 Q9RW80]
+
** [http://www.uniprot.org/uniprot/P73495 P73495]
−
** [http://www.uniprot.org/uniprot/P56067 P56067]
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/P63873 P63873]
+
{{#set: common-name=1,4-dihydroxy-2-naphthoyl-coa synthase}}
−
** [http://www.uniprot.org/uniprot/Q9CI26 Q9CI26]
+
{{#set: ec-number=ec-4.1.3.36}}
−
** [http://www.uniprot.org/uniprot/Q9ZMW6 Q9ZMW6]
+
{{#set: nb gene associated=1}}
−
** [http://www.uniprot.org/uniprot/P45040 P45040]
 
−
** [http://www.uniprot.org/uniprot/Q9WZD3 Q9WZD3]
 
−
** [http://www.uniprot.org/uniprot/Q9CHF0 Q9CHF0]
 
−
** [http://www.uniprot.org/uniprot/P0A534 P0A534]
 
−
** [http://www.uniprot.org/uniprot/P71128 P71128]
 
−
** [http://www.uniprot.org/uniprot/O05393 O05393]
 
−
** [http://www.uniprot.org/uniprot/O34476 O34476]
 
−
** [http://www.uniprot.org/uniprot/Q9JQL6 Q9JQL6]
 
−
** [http://www.uniprot.org/uniprot/P38076 P38076]
 
−
** [http://www.uniprot.org/uniprot/Q7M1J2 Q7M1J2]
 
−
** [http://www.uniprot.org/uniprot/P29848 P29848]
 
−
** [http://www.uniprot.org/uniprot/P32260 P32260]
 
−
** [http://www.uniprot.org/uniprot/Q00834 Q00834]
 
−
** [http://www.uniprot.org/uniprot/Q43317 Q43317]
 
−
** [http://www.uniprot.org/uniprot/P47999 P47999]
 
−
** [http://www.uniprot.org/uniprot/Q43726 Q43726]
 
−
** [http://www.uniprot.org/uniprot/P80608 P80608]
 
−
** [http://www.uniprot.org/uniprot/Q59447 Q59447]
 
−
** [http://www.uniprot.org/uniprot/P53206 P53206]
 
−
** [http://www.uniprot.org/uniprot/P37887 P37887]
 
−
** [http://www.uniprot.org/uniprot/Q59529 Q59529]
 
−
** [http://www.uniprot.org/uniprot/P0A1E3 P0A1E3]
 
−
** [http://www.uniprot.org/uniprot/P0ABK5 P0ABK5]
 
−
** [http://www.uniprot.org/uniprot/P16703 P16703]
 
−
** [http://www.uniprot.org/uniprot/O81154 O81154]
 
−
** [http://www.uniprot.org/uniprot/O81155 O81155]
 
−
** [http://www.uniprot.org/uniprot/O81523 O81523]
 
−
** [http://www.uniprot.org/uniprot/Q93244 Q93244]
 
−
** [http://www.uniprot.org/uniprot/O45679 O45679]
 
−
** [http://www.uniprot.org/uniprot/Q9S2H1 Q9S2H1]
 
−
** [http://www.uniprot.org/uniprot/P87131 P87131]
 
−
** [http://www.uniprot.org/uniprot/Q9XDU7 Q9XDU7]
 
−
** [http://www.uniprot.org/uniprot/Q9UWP0 Q9UWP0]
 
−
** [http://www.uniprot.org/uniprot/O32978 O32978]
 
−
** [http://www.uniprot.org/uniprot/Q9RAS8 Q9RAS8]
 
−
** [http://www.uniprot.org/uniprot/Q9S757 Q9S757]
 
−
** [http://www.uniprot.org/uniprot/Q9S6Z7 Q9S6Z7]
 
−
** [http://www.uniprot.org/uniprot/Q43725 Q43725]
 
−
** [http://www.uniprot.org/uniprot/Q9SMY4 Q9SMY4]
 
−
</div>
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=o-acetylserine sulfhydrylase|cysteine synthase}}
 
−
{{#set: ec-number=ec-2.5.1.47}}
 
−
{{#set: nb gene associated=3}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}

Revision as of 09:30, 27 August 2019

Reaction NAPHTHOATE-SYN-RXN

  • direction:
    • left-to-right
  • common-name:
    • 1,4-dihydroxy-2-naphthoyl-coa synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5837, 2-carboxy-1,4-naphthoquinol biosynthesis: PWY-5837
    • 4 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-9463&oldid=36060"