Difference between revisions of "RXN-9510"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.5.1.32-RXN 2.5.1.32-RXN] == * direction: ** left-to-right * common-name: ** prephytoene diphospha...")
 
(Created page with "Category:reaction == Reaction RXN-9510 == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/1.5.1.42 ec-1.5.1.42] == Reaction formula == * 1 [[FMNH2]...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.5.1.32-RXN 2.5.1.32-RXN] ==
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== Reaction RXN-9510 ==
 
* direction:
 
* direction:
−
** left-to-right
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** reversible
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* common-name:
+
* ec-number:
−
** prephytoene diphosphate synthase
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** [http://enzyme.expasy.org/EC/1.5.1.42 ec-1.5.1.42]
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* synonymous:
 
−
** geranylgeranyl-diphosphate geranylgeranyltransferase
 
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** psase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 2 [[GERANYLGERANYL-PP]][c] '''=>''' 1 [[CPD-464]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[FMNH2]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[FMN]][c] '''+''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ02885]]
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* Gene: [[SJ22257]]
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** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7943]], lycopadiene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7943 PWY-7943]
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* [[PWY-7723]], bacterial bioluminescence:
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** '''1''' reactions found over '''7''' reactions in the full pathway
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** '''2''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-6475]], trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6475 PWY-6475]
 
−
** '''8''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-6287]], neurosporene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6287 PWY-6287]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* METANETX-RXN : MNXR99607
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22297 22297]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R02065 R02065]
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** [http://www.genome.jp/dbget-bin/www_bget?R05705 R05705]
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* UNIPROT:
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{{#set: direction=reversible}}
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** [http://www.uniprot.org/uniprot/P53609 P53609]
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{{#set: ec-number=ec-1.5.1.42}}
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** [http://www.uniprot.org/uniprot/P37295 P37295]
 
−
** [http://www.uniprot.org/uniprot/P22872 P22872]
 
−
** [http://www.uniprot.org/uniprot/P53610 P53610]
 
−
** [http://www.uniprot.org/uniprot/P53612 P53612]
 
−
** [http://www.uniprot.org/uniprot/P17056 P17056]
 
−
** [http://www.uniprot.org/uniprot/P49293 P49293]
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=prephytoene diphosphate synthase}}
 
−
{{#set: synonymous=psase|geranylgeranyl-diphosphate geranylgeranyltransferase}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=3}}
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{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Latest revision as of 11:18, 18 March 2021

Reaction RXN-9510

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7723, bacterial bioluminescence:
    • 2 reactions found over 8 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR99607
  • LIGAND-RXN:





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