Difference between revisions of "RXN-9515"

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(Created page with "Category:reaction == Reaction RXN-7698 == * direction: ** left-to-right * common-name: ** very-long-chain 3-oxoacyl-coa reductase ** acetoacetyl-coa reductase * ec-number:...")
(Created page with "Category:reaction == Reaction RXN-17112 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.14.19.3 ec-1.14.19.3] == Reaction formula == * 1 ...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-7698 ==
+
== Reaction RXN-17112 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** very-long-chain 3-oxoacyl-coa reductase
 
** acetoacetyl-coa reductase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/1.1.1.330 ec-1.1.1.330]
+
** [http://enzyme.expasy.org/EC/1.14.19.3 ec-1.14.19.3]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Very-Long-Chain-oxoacyl-CoAs]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[Very-Long-Chain-3-Hydroxyacyl-CoAs]][c]
+
* 1 [[CPD-17328]][c] '''+''' 2 [[FERROCYTOCHROME-B5]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[CPD-18491]][c] '''+''' 2 [[FERRICYTOCHROME-B5]][c] '''+''' 2 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ06969]]
+
* Gene: [[SJ05483]]
** Category: [[annotation]]
+
** Category: [[orthology]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
* Gene: [[SJ01444]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-5080]], very long chain fatty acid biosynthesis I:
+
* [[PWY-7726]], (4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase):
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''8''' reactions found over '''13''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22256 22256]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R01779 R01779]
 
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/Q9ZGI8 Q9ZGI8]
 
** [http://www.uniprot.org/uniprot/Q9Z3Y5 Q9Z3Y5]
 
** [http://www.uniprot.org/uniprot/P45375 P45375]
 
** [http://www.uniprot.org/uniprot/P23238 P23238]
 
** [http://www.uniprot.org/uniprot/P14697 P14697]
 
** [http://www.uniprot.org/uniprot/P17611 P17611]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=very-long-chain 3-oxoacyl-coa reductase|acetoacetyl-coa reductase}}
+
{{#set: ec-number=ec-1.14.19.3}}
{{#set: ec-number=ec-1.1.1.330}}
+
{{#set: nb gene associated=1}}
{{#set: nb gene associated=2}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:34, 5 January 2021

Reaction RXN-17112

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7726, (4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase):
    • 8 reactions found over 13 reactions in the full pathway

Reconstruction information

External links