Difference between revisions of "RXN-9515"
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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15684 RXN-15684] == * direction: ** left-to-right * common-name: ** fad-dependent 3-benzyl-3,6...") |
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTAMINOTRANS-RXN HISTAMINOTRANS-RXN] == * direction: ** reversible * common-name: ** l-phenylalan...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN- | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTAMINOTRANS-RXN HISTAMINOTRANS-RXN] == |
* direction: | * direction: | ||
− | ** | + | ** reversible |
* common-name: | * common-name: | ||
− | ** | + | ** l-phenylalanine:2-oxoglutarate aminotransferase |
− | ** | + | ** histidinol-phosphate aminotransferase |
− | |||
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/2.6.1.9 ec-2.6.1.9] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[L-HISTIDINOL-P]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[IMIDAZOLE-ACETOL-P]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ07646]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
− | * Gene: [[ | + | * Gene: [[SJ05778]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a |
− | ** Category: [[ | + | * Gene: [[SJ04188]] |
− | *** Source: [[ | + | ** Category: [[annotation]] |
− | * Gene: [[ | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a |
+ | * Gene: [[SJ20943]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[PWY | + | * [[HISTSYN-PWY]], L-histidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HISTSYN-PWY HISTSYN-PWY] |
− | ** ''' | + | ** '''10''' reactions found over '''10''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * category: [[orthology]]; source: [[ | + | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a |
+ | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
− | {{#set: direction= | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | {{#set: common-name= | + | * RHEA: |
− | {{#set: ec-number=ec- | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23747 23747] |
− | {{#set: nb gene associated= | + | * LIGAND-RXN: |
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R03243 R03243] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P17731 P17731] | ||
+ | ** [http://www.uniprot.org/uniprot/P17736 P17736] | ||
+ | ** [http://www.uniprot.org/uniprot/P56099 P56099] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PII2 Q9PII2] | ||
+ | ** [http://www.uniprot.org/uniprot/Q02135 Q02135] | ||
+ | ** [http://www.uniprot.org/uniprot/Q58365 Q58365] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JTH8 Q9JTH8] | ||
+ | ** [http://www.uniprot.org/uniprot/P44423 P44423] | ||
+ | ** [http://www.uniprot.org/uniprot/P16246 P16246] | ||
+ | ** [http://www.uniprot.org/uniprot/P28735 P28735] | ||
+ | ** [http://www.uniprot.org/uniprot/P36605 P36605] | ||
+ | ** [http://www.uniprot.org/uniprot/P07172 P07172] | ||
+ | ** [http://www.uniprot.org/uniprot/O82030 O82030] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9X7B8 Q9X7B8] | ||
+ | ** [http://www.uniprot.org/uniprot/P10369 P10369] | ||
+ | ** [http://www.uniprot.org/uniprot/P06986 P06986] | ||
+ | </div> | ||
+ | {{#set: direction=reversible}} | ||
+ | {{#set: common-name=l-phenylalanine:2-oxoglutarate aminotransferase|histidinol-phosphate aminotransferase}} | ||
+ | {{#set: ec-number=ec-2.6.1.9}} | ||
+ | {{#set: nb gene associated=4}} | ||
{{#set: nb pathway associated=1}} | {{#set: nb pathway associated=1}} | ||
− | {{#set: reconstruction category=orthology | + | {{#set: reconstruction category=annotation|orthology}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=saccharina_japonica_genome| | + | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome|output_pantograph_arabidopsis_thaliana}} |
Revision as of 09:32, 27 August 2019
Contents
Reaction HISTAMINOTRANS-RXN
- direction:
- reversible
- common-name:
- l-phenylalanine:2-oxoglutarate aminotransferase
- histidinol-phosphate aminotransferase
- ec-number:
Reaction formula
- 1 2-KETOGLUTARATE[c] + 1 L-HISTIDINOL-P[c] <=> 1 GLT[c] + 1 IMIDAZOLE-ACETOL-P[c]
Gene(s) associated with this reaction
- Gene: SJ07646
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ05778
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ04188
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ20943
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- HISTSYN-PWY, L-histidine biosynthesis: HISTSYN-PWY
- 10 reactions found over 10 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
External links