Difference between revisions of "RXN-9524"

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(Created page with "Category:reaction == Reaction NQOR-RXN == * direction: ** left-to-right * common-name: ** nad(p)h:quinone oxidoreductase ** nad(p)h dehydrogenase (quinone) * ec-number: **...")
(Created page with "Category:reaction == Reaction DIAMINOPIMELATE-DEHYDROGENASE-RXN == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/1.4.1.16 ec-1.4.1.16] == Reactio...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction NQOR-RXN ==
+
== Reaction DIAMINOPIMELATE-DEHYDROGENASE-RXN ==
 
* direction:
 
* direction:
** left-to-right
+
** reversible
* common-name:
 
** nad(p)h:quinone oxidoreductase
 
** nad(p)h dehydrogenase (quinone)
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/1.6.5.2 ec-1.6.5.2]
+
** [http://enzyme.expasy.org/EC/1.4.1.16 ec-1.4.1.16]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[ETR-Quinones]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[ETR-Quinols]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
+
* 1 [[MESO-DIAMINOPIMELATE]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[L-ALPHA-AMINO-EPSILON-KETO-PIMELATE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ17755]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ18408]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-2942]], L-lysine biosynthesis III:
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[previous_meneco]]; tool: [[curation]]; comment: reaction added with meneco (previous version)
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11357 11357]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13564 13564]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02755 R02755]
 
* UNIPROT:
 
* UNIPROT:
** [http://www.uniprot.org/uniprot/P15559 P15559]
+
** [http://www.uniprot.org/uniprot/P04964 P04964]
** [http://www.uniprot.org/uniprot/P16083 P16083]
+
{{#set: direction=reversible}}
** [http://www.uniprot.org/uniprot/P05982 P05982]
+
{{#set: ec-number=ec-1.4.1.16}}
** [http://www.uniprot.org/uniprot/Q64669 Q64669]
+
{{#set: nb gene associated=0}}
** [http://www.uniprot.org/uniprot/P0A756 P0A756]
+
{{#set: nb pathway associated=1}}
** [http://www.uniprot.org/uniprot/P43340 P43340]
+
{{#set: reconstruction category=manual}}
** [http://www.uniprot.org/uniprot/P0A754 P0A754]
+
{{#set: reconstruction tool=curation}}
** [http://www.uniprot.org/uniprot/P45245 P45245]
+
{{#set: reconstruction comment=reaction added with meneco (previous version)}}
{{#set: direction=left-to-right}}
+
{{#set: reconstruction source=previous_meneco}}
{{#set: common-name=nad(p)h dehydrogenase (quinone)|nad(p)h:quinone oxidoreductase}}
 
{{#set: ec-number=ec-1.6.5.2}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 

Revision as of 15:02, 5 January 2021

Reaction DIAMINOPIMELATE-DEHYDROGENASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-2942, L-lysine biosynthesis III:
    • 6 reactions found over 7 reactions in the full pathway

Reconstruction information

External links