Difference between revisions of "RXN-9533"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6949 PWY-6949] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-3398 tax-33...")
(Created page with "Category:reaction == Reaction RXN-9533 == * direction: ** left-to-right * common-name: ** fatty acid synthase ** (3r)-3-hydroxydodecanoyl-[acyl-carrier protein] dehydratas...")
 
(7 intermediate revisions by 3 users not shown)
Line 1: Line 1:
−
[[Category:pathway]]
+
[[Category:reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6949 PWY-6949] ==
+
== Reaction RXN-9533 ==
−
* taxonomic-range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=tax-3398 tax-3398]
+
** left-to-right
 
* common-name:
 
* common-name:
−
** diboa-glucoside biosynthesis
+
** fatty acid synthase
−
== Reaction(s) found ==
+
** (3r)-3-hydroxydodecanoyl-[acyl-carrier protein] dehydratase
−
* [[RXN0-2381]]
+
* ec-number:
−
== Reaction(s) not found ==
+
** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7021 RXN-7021]
+
** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-6683 RXN-6683]
+
** [http://enzyme.expasy.org/EC/4.2.1.59 ec-4.2.1.59]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-6681 RXN-6681]
+
== Reaction formula ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-6684 RXN-6684]
+
* 1 [[R-3-hydroxydodecanoyl-ACPs]][c] '''=>''' 1 [[Dodec-2-enoyl-ACPs]][c] '''+''' 1 [[WATER]][c]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-6682 RXN-6682]
+
== Gene(s) associated with this reaction  ==
−
{{#set: taxonomic-range=tax-3398}}
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
{{#set: common-name=diboa-glucoside biosynthesis}}
+
* Gene: [[SJ00613]]
−
{{#set: nb reaction found=1}}
+
** Category: [[annotation]]
−
{{#set: completion rate=0.17}}
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
{{#set: nb total reaction=6}}
+
* Gene: [[SJ00320]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ03883]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ06944]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ06617]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ06616]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ04769]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ04443]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ17743]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ13014]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ10275]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ19629]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ15983]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ18059]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ11672]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ10624]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
</div>
 +
== Pathway(s)  ==
 +
* [[PWY-5971]], palmitate biosynthesis (type II fatty acid synthase):
 +
** '''31''' reactions found over '''31''' reactions in the full pathway
 +
* [[PWY-7664]], oleate biosynthesis IV (anaerobic):
 +
** '''13''' reactions found over '''14''' reactions in the full pathway
 +
* [[PWY-5994]], palmitate biosynthesis (type I fatty acid synthase):
 +
** '''31''' reactions found over '''31''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
== External links  ==
 +
* METANETX-RXN : MNXR122851
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=fatty acid synthase|(3r)-3-hydroxydodecanoyl-[acyl-carrier protein] dehydratase}}
 +
{{#set: ec-number=ec-4.2.1.59|ec-2.3.1.85|ec-2.3.1.86}}
 +
{{#set: nb gene associated=16}}
 +
{{#set: nb pathway associated=3}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction RXN-9533

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5971, palmitate biosynthesis (type II fatty acid synthase):
    • 31 reactions found over 31 reactions in the full pathway
  • PWY-7664, oleate biosynthesis IV (anaerobic):
    • 13 reactions found over 14 reactions in the full pathway
  • PWY-5994, palmitate biosynthesis (type I fatty acid synthase):
    • 31 reactions found over 31 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR122851

Property "Common-name" (as page type) with input value "(3r)-3-hydroxydodecanoyl-[acyl-carrier protein] dehydratase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-9533&oldid=142466"