Difference between revisions of "RXN-9535"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6906 PWY-6906] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-641 tax-641...")
(Created page with "Category:reaction == Reaction RXN-9535 == * direction: ** left-to-right * common-name: ** fatty acid synthase * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.179 ec-2.3...")
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6906 PWY-6906] ==
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== Reaction RXN-9535 ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-641 tax-641]
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** left-to-right
 
* common-name:
 
* common-name:
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** chitin derivatives degradation
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** fatty acid synthase
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== Reaction(s) found ==
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* ec-number:
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* [[PHOSACETYLGLUCOSAMINEMUT-RXN]]
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** [http://enzyme.expasy.org/EC/2.3.1.179 ec-2.3.1.179]
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== Reaction(s) not found ==
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** [http://enzyme.expasy.org/EC/2.3.1.41 ec-2.3.1.41]
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* [http://metacyc.org/META/NEW-IMAGE?object=GLUCOSAMINE-KINASE-RXN GLUCOSAMINE-KINASE-RXN]
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** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85]
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* [http://metacyc.org/META/NEW-IMAGE?object=GLUCOSAMINE-6-P-DEAMIN-RXN GLUCOSAMINE-6-P-DEAMIN-RXN]
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** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86]
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* [http://metacyc.org/META/NEW-IMAGE?object=NAG6PDEACET-RXN NAG6PDEACET-RXN]
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* synonymous:
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* [http://metacyc.org/META/NEW-IMAGE?object=TRANS-RXN0-445 TRANS-RXN0-445]
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** acyl-[acyl-carrier-protein]:malonyl-[acyl-carrier-protein] c-acyltransferase (decarboxylating)
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* [http://metacyc.org/META/NEW-IMAGE?object=N-ACETYLGLUCOSAMINE-KINASE-RXN N-ACETYLGLUCOSAMINE-KINASE-RXN]
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** β-ketoacyl-[acyl carrier protein] synthase
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12627 RXN-12627]
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** β-ketoacyl-acyl carrier protein synthetase
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12629 RXN-12629]
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** β-ketoacyl-acp synthase i
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{{#set: taxonomic-range=tax-641}}
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** β-ketoacyl acyl carrier protein synthase
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{{#set: common-name=chitin derivatives degradation}}
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** condensing enzyme
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{{#set: nb reaction found=1}}
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** 3-oxoacyl-[acyl-carrier-protein] synthase
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{{#set: completion rate=0.12}}
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== Reaction formula ==
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{{#set: nb total reaction=8}}
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* 1 [[Dodecanoyl-ACPs]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-oxo-myristoyl-ACPs]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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== Gene(s) associated with this reaction  ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* Gene: [[SJ15984]]
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ17743]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ06616]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ03883]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ00005]]
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ06617]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ00613]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ18059]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ13014]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ04769]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ10624]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ00320]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ15983]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ06944]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ11672]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ19629]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ04443]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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</div>
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== Pathway(s)  ==
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* [[PWY-5971]], palmitate biosynthesis II (bacteria and plant cytoplasm):
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** '''31''' reactions found over '''31''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== External links  ==
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=fatty acid synthase}}
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{{#set: ec-number=ec-2.3.1.179|ec-2.3.1.85|ec-2.3.1.41|ec-2.3.1.86}}
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{{#set: synonymous=&beta;-ketoacyl-[acyl carrier protein] synthase|&beta;-ketoacyl-acyl carrier protein synthetase|acyl-[acyl-carrier-protein]:malonyl-[acyl-carrier-protein] c-acyltransferase (decarboxylating)|&beta;-ketoacyl-acp synthase i|&beta;-ketoacyl acyl carrier protein synthase|condensing enzyme|3-oxoacyl-[acyl-carrier-protein] synthase}}
 +
{{#set: nb gene associated=17}}
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{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}

Revision as of 20:43, 18 December 2020

Reaction RXN-9535

  • direction:
    • left-to-right
  • common-name:
    • fatty acid synthase
  • ec-number:
  • synonymous:
    • acyl-[acyl-carrier-protein]:malonyl-[acyl-carrier-protein] c-acyltransferase (decarboxylating)
    • β-ketoacyl-[acyl carrier protein] synthase
    • β-ketoacyl-acyl carrier protein synthetase
    • β-ketoacyl-acp synthase i
    • β-ketoacyl acyl carrier protein synthase
    • condensing enzyme
    • 3-oxoacyl-[acyl-carrier-protein] synthase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5971, palmitate biosynthesis II (bacteria and plant cytoplasm):
    • 31 reactions found over 31 reactions in the full pathway

Reconstruction information

External links

  • Property "Synonymous" (as page type) with input value "β-ketoacyl-[acyl carrier protein] synthase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
  • Property "Synonymous" (as page type) with input value "acyl-[acyl-carrier-protein]:malonyl-[acyl-carrier-protein] c-acyltransferase (decarboxylating)" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
  • Property "Synonymous" (as page type) with input value "3-oxoacyl-[acyl-carrier-protein] synthase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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