Difference between revisions of "RXN-9543"

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(Created page with "Category:reaction == Reaction 2.1.1.79-RXN == * direction: ** left-to-right * common-name: ** cyclopropane fatty acyl phospholipid synthase * ec-number: ** [http://enzyme....")
(Created page with "Category:reaction == Reaction RXN-10706 == * direction: ** left-to-right * common-name: ** acyl-coa oxidase ** fatty-acyl coenzyme a oxidase * ec-number: ** [http://enzyme...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 2.1.1.79-RXN ==
+
== Reaction RXN-10706 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** cyclopropane fatty acyl phospholipid synthase
+
** acyl-coa oxidase
 +
** fatty-acyl coenzyme a oxidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.1.1.79 ec-2.1.1.79]
+
** [http://enzyme.expasy.org/EC/1.3.3.6 ec-1.3.3.6]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Phospholipid-Olefinic-Fatty-Acids]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Phospholipid-Cyclopropane-Fatty-Acids]][c]
+
* 1 [[CPD-11521]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-11522]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ13641]]
+
* Gene: [[SJ07451]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ07452]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ03090]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ13468]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ19669]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY0-541]], cyclopropane fatty acid (CFA) biosynthesis:
+
* [[PWY-735]], jasmonic acid biosynthesis:
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''16''' reactions found over '''19''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11989 11989]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03411 R03411]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P0A9H7 P0A9H7]
 
−
** [http://www.uniprot.org/uniprot/O69687 O69687]
 
−
** [http://www.uniprot.org/uniprot/Q9PNB2 Q9PNB2]
 
−
** [http://www.uniprot.org/uniprot/Q9ZKG8 Q9ZKG8]
 
−
** [http://www.uniprot.org/uniprot/O67624 O67624]
 
−
** [http://www.uniprot.org/uniprot/O25171 O25171]
 
−
** [http://www.uniprot.org/uniprot/O53732 O53732]
 
−
** [http://www.uniprot.org/uniprot/Q9XTE1 Q9XTE1]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=cyclopropane fatty acyl phospholipid synthase}}
+
{{#set: common-name=fatty-acyl coenzyme a oxidase|acyl-coa oxidase}}
−
{{#set: ec-number=ec-2.1.1.79}}
+
{{#set: ec-number=ec-1.3.3.6}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=5}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}

Revision as of 11:20, 15 January 2021

Reaction RXN-10706

  • direction:
    • left-to-right
  • common-name:
    • acyl-coa oxidase
    • fatty-acyl coenzyme a oxidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-735, jasmonic acid biosynthesis:
    • 16 reactions found over 19 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-9543&oldid=113885"