Difference between revisions of "RXN-9545"

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(Created page with "Category:reaction == Reaction ACECOATRANS-RXN-CPD-10280/ACET//TETRACOSANOATE/ACETYL-COA.42. == * direction: ** left-to-right == Reaction formula == * 1.0 ACET[c] '''+'...")
(Created page with "Category:reaction == Reaction DIPHTINE--AMMONIA-LIGASE-RXN == * direction: ** left-to-right * common-name: ** diphthine—ammonia ligase * ec-number: ** [http://enzyme...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction ACECOATRANS-RXN-CPD-10280/ACET//TETRACOSANOATE/ACETYL-COA.42. ==
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== Reaction DIPHTINE--AMMONIA-LIGASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** diphthine—ammonia ligase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/6.3.1.14 ec-6.3.1.14]
 
== Reaction formula ==
 
== Reaction formula ==
* 1.0 [[ACET]][c] '''+''' 1.0 [[CPD-10280]][c] '''=>''' 1.0 [[ACETYL-COA]][c] '''+''' 1.0 [[TETRACOSANOATE]][c]
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* 1 [[AMMONIUM]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[DIPHTINE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[DIPHTHAMIDE]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[SJ03200]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6482]], diphthamide biosynthesis I (archaea):
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7546]], diphthamide biosynthesis II (eukaryotes):
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR115847
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19754 19754]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03613 R03613]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: nb gene associated=0}}
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{{#set: common-name=diphthine—ammonia ligase}}
{{#set: nb pathway associated=0}}
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{{#set: ec-number=ec-6.3.1.14}}
{{#set: reconstruction category=gap-filling}}
+
{{#set: nb gene associated=1}}
{{#set: reconstruction tool=meneco}}
+
{{#set: nb pathway associated=2}}
{{#set: reconstruction comment=added for gapfilling}}
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{{#set: reconstruction category=annotation}}
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
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{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 08:35, 15 March 2021

Reaction DIPHTINE--AMMONIA-LIGASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • diphthine—ammonia ligase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6482, diphthamide biosynthesis I (archaea):
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7546, diphthamide biosynthesis II (eukaryotes):
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR115847
  • RHEA:
  • LIGAND-RXN: