Difference between revisions of "RXN-9545"

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(Created page with "Category:reaction == Reaction RXN66-483 == * direction: ** left-to-right * common-name: ** long-chain fatty acid-coa ligase ** 2-methyl branched fatty acid-coa ligase * ec...")
(Created page with "Category:reaction == Reaction RXN-9545 == * direction: ** left-to-right * common-name: ** 3-hydroxystearoyl-dehydratase ** 3-hydroxyacyl-coa dehydrase * ec-number: ** [htt...")
 
(2 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN66-483 ==
+
== Reaction RXN-9545 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** long-chain fatty acid-coa ligase
+
** 3-hydroxystearoyl-dehydratase
−
** 2-methyl branched fatty acid-coa ligase
+
** 3-hydroxyacyl-coa dehydrase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.2.1.3 ec-6.2.1.3]
+
** [http://enzyme.expasy.org/EC/4.2.1.119 ec-4.2.1.119]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-Me-Branched-234-Sat-FA]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[2-Me-Branched-234-Sat-Fatty-Acyl-CoA]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[CPD-10261]][c] '''=>''' 1 [[CPD-10262]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ03584]]
−
* Gene: [[SJ05591]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ08692]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ13972]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ03650]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ08691]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ04769]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ08690]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY66-387]], &beta;-methyl-branched fatty acid &alpha;-oxidation:
+
* [[PWY-5972]], stearate biosynthesis I (animals):
 
** '''4''' reactions found over '''6''' reactions in the full pathway
 
** '''4''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR122854
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R07760 R07760]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=long-chain fatty acid-coa ligase|2-methyl branched fatty acid-coa ligase}}
+
{{#set: common-name=3-hydroxyacyl-coa dehydrase|3-hydroxystearoyl-dehydratase}}
−
{{#set: ec-number=ec-6.2.1.3}}
+
{{#set: ec-number=ec-4.2.1.119}}
−
{{#set: nb gene associated=6}}
+
{{#set: nb gene associated=2}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction RXN-9545

  • direction:
    • left-to-right
  • common-name:
    • 3-hydroxystearoyl-dehydratase
    • 3-hydroxyacyl-coa dehydrase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5972, stearate biosynthesis I (animals):
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR122854
  • LIGAND-RXN:





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