Difference between revisions of "RXN-9549"

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(Created page with "Category:reaction == Reaction PEPDEPHOS-RXN == * direction: ** left-to-right * common-name: ** pyruvate kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.40 ec-2.7...")
(Created page with "Category:reaction == Reaction 3.4.21.4-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/3.4.21.4 ec-3.4.21.4] == Reaction formula == * 1 [...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PEPDEPHOS-RXN ==
+
== Reaction 3.4.21.4-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** pyruvate kinase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.1.40 ec-2.7.1.40]
+
** [http://enzyme.expasy.org/EC/3.4.21.4 ec-3.4.21.4]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ADP]][c] '''+''' 1 [[PHOSPHO-ENOL-PYRUVATE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[ATP]][c] '''+''' 1 [[PYRUVATE]][c]
+
* 1 [[General-Protein-Substrates]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Peptides-holder]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ12361]]
−
* Gene: [[SJ17585]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ18193]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ18192]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ13451]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* [[P122-PWY]], heterolactic fermentation:
 
−
** '''16''' reactions found over '''18''' reactions in the full pathway
 
−
* [[PWY-5484]], glycolysis II (from fructose 6-phosphate):
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[P124-PWY]], Bifidobacterium shunt:
 
−
** '''12''' reactions found over '''15''' reactions in the full pathway
 
−
* [[PWY-1042]], glycolysis IV (plant cytosol):
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[P341-PWY]], glycolysis V (Pyrococcus):
 
−
** '''6''' reactions found over '''10''' reactions in the full pathway
 
−
* [[GLYCOLYSIS]], glycolysis I (from glucose 6-phosphate):
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[ANAGLYCOLYSIS-PWY]], glycolysis III (from glucose):
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-7003]], glycerol degradation to butanol:
 
−
** '''8''' reactions found over '''6''' reactions in the full pathway
 
−
* [[FERMENTATION-PWY]], mixed acid fermentation:
 
−
** '''11''' reactions found over '''16''' reactions in the full pathway
 
−
* [[PWY-6886]], 1-butanol autotrophic biosynthesis (engineered):
 
−
** '''8''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7218]], photosynthetic 3-hydroxybutanoate biosynthesis (engineered):
 
−
** '''7''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5723]], Rubisco shunt:
 
−
** '''10''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-2221]], Entner-Doudoroff pathway III (semi-phosphorylative):
 
−
** '''6''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-7383]], anaerobic energy metabolism (invertebrates, cytosol):
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6901]], superpathway of glucose and xylose degradation:
 
−
** '''10''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-6142]], gluconeogenesis II (Methanobacterium thermoautotrophicum):
 
−
** '''10''' reactions found over '''13''' reactions in the full pathway
 
−
* [[NPGLUCAT-PWY]], Entner-Doudoroff pathway II (non-phosphorylative):
 
−
** '''4''' reactions found over '''9''' reactions in the full pathway
 
−
</div>
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18157 18157]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00200 R00200]
 
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q7M034 Q7M034]
+
** [http://www.uniprot.org/uniprot/P07477 P07477]
−
** [http://www.uniprot.org/uniprot/P11979 P11979]
+
** [http://www.uniprot.org/uniprot/P08426 P08426]
−
** [http://www.uniprot.org/uniprot/P11980 P11980]
+
** [http://www.uniprot.org/uniprot/P35051 P35051]
−
** [http://www.uniprot.org/uniprot/Q07637 Q07637]
+
** [http://www.uniprot.org/uniprot/P19799 P19799]
−
** [http://www.uniprot.org/uniprot/P34038 P34038]
+
** [http://www.uniprot.org/uniprot/Q7M434 Q7M434]
−
** [http://www.uniprot.org/uniprot/P43924 P43924]
+
** [http://www.uniprot.org/uniprot/Q7M435 Q7M435]
−
** [http://www.uniprot.org/uniprot/Q57572 Q57572]
+
** [http://www.uniprot.org/uniprot/Q7M390 Q7M390]
−
** [http://www.uniprot.org/uniprot/P0AD61 P0AD61]
+
** [http://www.uniprot.org/uniprot/Q7LZP8 Q7LZP8]
−
** [http://www.uniprot.org/uniprot/P19680 P19680]
+
** [http://www.uniprot.org/uniprot/Q7LZF8 Q7LZF8]
−
** [http://www.uniprot.org/uniprot/Q9PIB0 Q9PIB0]
+
** [http://www.uniprot.org/uniprot/Q7M433 Q7M433]
−
** [http://www.uniprot.org/uniprot/P80885 P80885]
+
** [http://www.uniprot.org/uniprot/P07146 P07146]
−
** [http://www.uniprot.org/uniprot/Q9UYU6 Q9UYU6]
+
** [http://www.uniprot.org/uniprot/P07478 P07478]
−
** [http://www.uniprot.org/uniprot/Q9JWX8 Q9JWX8]
+
** [http://www.uniprot.org/uniprot/Q7M3N1 Q7M3N1]
−
** [http://www.uniprot.org/uniprot/P47458 P47458]
+
** [http://www.uniprot.org/uniprot/Q7M432 Q7M432]
−
** [http://www.uniprot.org/uniprot/Q46078 Q46078]
+
** [http://www.uniprot.org/uniprot/P32821 P32821]
−
** [http://www.uniprot.org/uniprot/P30614 P30614]
+
** [http://www.uniprot.org/uniprot/P32822 P32822]
−
** [http://www.uniprot.org/uniprot/P22200 P22200]
+
** [http://www.uniprot.org/uniprot/P12788 P12788]
−
** [http://www.uniprot.org/uniprot/Q27788 Q27788]
+
** [http://www.uniprot.org/uniprot/P35050 P35050]
−
** [http://www.uniprot.org/uniprot/P51182 P51182]
+
** [http://www.uniprot.org/uniprot/Q29463 Q29463]
−
** [http://www.uniprot.org/uniprot/P51181 P51181]
+
** [http://www.uniprot.org/uniprot/P35034 P35034]
−
** [http://www.uniprot.org/uniprot/P31865 P31865]
+
** [http://www.uniprot.org/uniprot/P35031 P35031]
−
** [http://www.uniprot.org/uniprot/P00549 P00549]
+
** [http://www.uniprot.org/uniprot/P35032 P35032]
−
** [http://www.uniprot.org/uniprot/P00548 P00548]
+
** [http://www.uniprot.org/uniprot/P35033 P35033]
−
** [http://www.uniprot.org/uniprot/P30613 P30613]
+
** [http://www.uniprot.org/uniprot/P35030 P35030]
−
** [http://www.uniprot.org/uniprot/O75758 O75758]
+
** [http://www.uniprot.org/uniprot/P35035 P35035]
−
** [http://www.uniprot.org/uniprot/P12928 P12928]
+
** [http://www.uniprot.org/uniprot/P35036 P35036]
−
** [http://www.uniprot.org/uniprot/O30853 O30853]
+
** [http://www.uniprot.org/uniprot/P16049 P16049]
−
** [http://www.uniprot.org/uniprot/P30615 P30615]
+
** [http://www.uniprot.org/uniprot/Q91041 Q91041]
−
** [http://www.uniprot.org/uniprot/P30616 P30616]
+
** [http://www.uniprot.org/uniprot/P35038 P35038]
−
** [http://www.uniprot.org/uniprot/Q02499 Q02499]
+
** [http://www.uniprot.org/uniprot/P35041 P35041]
−
** [http://www.uniprot.org/uniprot/P22360 P22360]
+
** [http://www.uniprot.org/uniprot/P35037 P35037]
−
** [http://www.uniprot.org/uniprot/P21599 P21599]
+
** [http://www.uniprot.org/uniprot/Q92099 Q92099]
−
** [http://www.uniprot.org/uniprot/P14618 P14618]
+
** [http://www.uniprot.org/uniprot/Q27761 Q27761]
−
** [http://www.uniprot.org/uniprot/Q42954 Q42954]
+
** [http://www.uniprot.org/uniprot/Q90629 Q90629]
−
** [http://www.uniprot.org/uniprot/Q40545 Q40545]
+
** [http://www.uniprot.org/uniprot/Q90628 Q90628]
−
** [http://www.uniprot.org/uniprot/P52480 P52480]
+
** [http://www.uniprot.org/uniprot/Q90627 Q90627]
−
** [http://www.uniprot.org/uniprot/P52489 P52489]
+
** [http://www.uniprot.org/uniprot/Q7M436 Q7M436]
−
** [http://www.uniprot.org/uniprot/P78031 P78031]
+
** [http://www.uniprot.org/uniprot/P35045 P35045]
−
** [http://www.uniprot.org/uniprot/Q55863 Q55863]
+
** [http://www.uniprot.org/uniprot/P00765 P00765]
−
** [http://www.uniprot.org/uniprot/P73534 P73534]
+
** [http://www.uniprot.org/uniprot/P00764 P00764]
−
** [http://www.uniprot.org/uniprot/O65595 O65595]
+
** [http://www.uniprot.org/uniprot/P06872 P06872]
−
** [http://www.uniprot.org/uniprot/Q42806 Q42806]
+
** [http://www.uniprot.org/uniprot/P06871 P06871]
−
** [http://www.uniprot.org/uniprot/Q43117 Q43117]
+
** [http://www.uniprot.org/uniprot/P00761 P00761]
−
** [http://www.uniprot.org/uniprot/Q10208 Q10208]
+
** [http://www.uniprot.org/uniprot/P00762 P00762]
 +
** [http://www.uniprot.org/uniprot/P00763 P00763]
 +
** [http://www.uniprot.org/uniprot/P00775 P00775]
 
</div>
 
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=pyruvate kinase}}
+
{{#set: ec-number=ec-3.4.21.4}}
−
{{#set: ec-number=ec-2.7.1.40}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb gene associated=4}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb pathway associated=17}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Revision as of 08:33, 15 March 2021

Reaction 3.4.21.4-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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