Difference between revisions of "RXN-9616"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN] == * direction:...")
(Created page with "Category:reaction == Reaction RXN-17105 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.14.19 ec-1.14.19] == Reaction formula == * 1 CPD-...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN] ==
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== Reaction RXN-17105 ==
 
* direction:
 
* direction:
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** reversible
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** left-to-right
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* common-name:
 
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** serine--pyruvate aminotransferase
 
 
* ec-number:
 
* ec-number:
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** [http://enzyme.expasy.org/EC/2.6.1.44 ec-2.6.1.44]
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** [http://enzyme.expasy.org/EC/1.14.19 ec-1.14.19]
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[GLYOX]][c] '''+''' 1 [[L-ALPHA-ALANINE]][c] '''<=>''' 1 [[GLY]][c] '''+''' 1 [[PYRUVATE]][c]
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* 1 [[CPD-12646]][c] '''+''' 2 [[FERROCYTOCHROME-B5]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[CPD-14407]][c] '''+''' 2 [[FERRICYTOCHROME-B5]][c] '''+''' 2 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ09475]]
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ07216]]
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ19809]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[GLYSYN-ALA-PWY]], glycine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=GLYSYN-ALA-PWY GLYSYN-ALA-PWY]
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* [[PWY-7725]], arachidonate biosynthesis V (8-detaturase, mammals):
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** '''1''' reactions found over '''1''' reactions in the full pathway
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** '''5''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: direction=left-to-right}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24248 24248]
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{{#set: ec-number=ec-1.14.19}}
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* LIGAND-RXN:
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{{#set: nb gene associated=0}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00369 R00369]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P31029 P31029]
 
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** [http://www.uniprot.org/uniprot/P31030 P31030]
 
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** [http://www.uniprot.org/uniprot/P41689 P41689]
 
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** [http://www.uniprot.org/uniprot/Q94055 Q94055]
 
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** [http://www.uniprot.org/uniprot/Q56YA5 Q56YA5]
 
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** [http://www.uniprot.org/uniprot/P21549 P21549]
 
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{{#set: direction=reversible}}
 
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{{#set: common-name=serine--pyruvate aminotransferase}}
 
−
{{#set: ec-number=ec-2.6.1.44}}
 
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{{#set: nb gene associated=3}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction category=gap-filling}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction tool=meneco}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction comment=added for gapfilling}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}
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{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}

Revision as of 20:44, 18 December 2020

Reaction RXN-17105

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7725, arachidonate biosynthesis V (8-detaturase, mammals):
    • 5 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-9616&oldid=50795"