Difference between revisions of "RXN-9650"

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(Created page with "Category:reaction == Reaction GALACTURIDYLYLTRANS-RXN == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/2.7.7.12 ec-2.7.7.12] == Reaction formula...")
(Created page with "Category:reaction == Reaction RXN-9650 == * direction: ** left-to-right * common-name: ** fatty acid synthase * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3....")
 
(One intermediate revision by the same user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GALACTURIDYLYLTRANS-RXN ==
+
== Reaction RXN-9650 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 +
* common-name:
 +
** fatty acid synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.7.12 ec-2.7.7.12]
+
** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86]
 +
** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85]
 +
** [http://enzyme.expasy.org/EC/2.3.1.41 ec-2.3.1.41]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-12575]][c] '''+''' 1 [[GALACTOSE-1P]][c] '''<=>''' 1 [[CPD-14553]][c] '''+''' 1 [[GLC-1-P]][c]
+
* 1 [[Hexanoyl-ACPs]][c] '''+''' 1 [[MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-Oxo-octanoyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CO-A]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ12257]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ15984]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ03883]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ11672]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ06617]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ10624]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ06944]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ00613]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ15983]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ06616]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ17743]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ04443]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ18059]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ00320]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ13014]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ19629]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ04769]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ00005]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6527]], stachyose degradation:
+
* [[PWY-5994]], palmitate biosynthesis (type I fatty acid synthase):
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
** '''31''' reactions found over '''31''' reactions in the full pathway
−
* [[PWY-6317]], D-galactose degradation I (Leloir pathway):
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY66-422]]:
 
−
** '''5''' reactions found over '''n.a''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* METANETX-RXN : MNXR122923
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13992 13992]
+
{{#set: direction=left-to-right}}
−
* LIGAND-RXN:
+
{{#set: common-name=fatty acid synthase}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00955 R00955]
+
{{#set: ec-number=ec-2.3.1.85|ec-2.3.1.41|ec-2.3.1.86}}
−
* UNIPROT:
+
{{#set: nb gene associated=17}}
−
** [http://www.uniprot.org/uniprot/P43424 P43424]
+
{{#set: nb pathway associated=1}}
−
** [http://www.uniprot.org/uniprot/P31764 P31764]
+
{{#set: reconstruction category=orthology|annotation}}
−
** [http://www.uniprot.org/uniprot/P07902 P07902]
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
−
** [http://www.uniprot.org/uniprot/P08431 P08431]
 
−
** [http://www.uniprot.org/uniprot/P09148 P09148]
 
−
** [http://www.uniprot.org/uniprot/P13212 P13212]
 
−
** [http://www.uniprot.org/uniprot/P09580 P09580]
 
−
{{#set: direction=reversible}}
 
−
{{#set: ec-number=ec-2.7.7.12}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=3}}
 
−
{{#set: reconstruction category=orthology}}
 
−
{{#set: reconstruction tool=pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction RXN-9650

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5994, palmitate biosynthesis (type I fatty acid synthase):
    • 31 reactions found over 31 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR122923





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