Difference between revisions of "RXN-9651"

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(Created page with "Category:reaction == Reaction RIBOSYLPYRIMIDINE-NUCLEOSIDASE-RXN == * direction: ** left-to-right * common-name: ** ribosylpyrimidine nucleosidase * ec-number: ** [http://...")
(Created page with "Category:reaction == Reaction RXN-16020 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.330 ec-1.1.1.330] == Reaction formula == * 1 ...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RIBOSYLPYRIMIDINE-NUCLEOSIDASE-RXN ==
+
== Reaction RXN-16020 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** ribosylpyrimidine nucleosidase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/3.2.2.8 ec-3.2.2.8]
+
** [http://enzyme.expasy.org/EC/1.1.1.330 ec-1.1.1.330]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[PROTON]][c] '''+''' 1 [[Pyrimidine-Nucleosides]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[D-Ribofuranose]][c] '''+''' 1 [[Pyrimidine-Bases]][c]
+
* 1 [[CPD-17262]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-17263]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ07903]]
+
* Gene: [[SJ06969]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7049]], icosapentaenoate biosynthesis II (6-desaturase, mammals):
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6958]], icosapentaenoate biosynthesis I (lower eukaryotes):
 +
** '''5''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R02172 R02172]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=ribosylpyrimidine nucleosidase}}
+
{{#set: ec-number=ec-1.1.1.330}}
{{#set: ec-number=ec-3.2.2.8}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=2}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 19:00, 14 January 2021

Reaction RXN-16020

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7049, icosapentaenoate biosynthesis II (6-desaturase, mammals):
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-6958, icosapentaenoate biosynthesis I (lower eukaryotes):
    • 5 reactions found over 8 reactions in the full pathway

Reconstruction information

External links