Difference between revisions of "RXN-9654"

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(Created page with "Category:reaction == Reaction RXN-17919 == * direction: ** left-to-right * common-name: ** dna ligase (atp) == Reaction formula == * 1 3-Hydroxy-Terminated-DNAs[c] '''...")
(Created page with "Category:reaction == Reaction FESGSHTHIO-RXN == * direction: ** left-to-right * common-name: ** s-sulfanylglutathione dioxygenase == Reaction formula == * 1 CPD-11281[...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-17919 ==
+
== Reaction FESGSHTHIO-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** dna ligase (atp)
+
** s-sulfanylglutathione dioxygenase
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[3-Hydroxy-Terminated-DNAs]][c] '''+''' 1 [[A-5-prime-PP-5-prime-DNA]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[DNA-N]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[CPD-11281]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-17866]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ15543]]
+
* Gene: [[SJ18452]]
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ13521]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ19344]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ16080]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[SULFUROX-PWY]], sulfur oxidation I (aerobic):
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5285]], sulfide oxidation III (to sulfite):
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7927]], sulfide oxidation IV (mitochondria):
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR115876
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12984 12984]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00781 R00781]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=dna ligase (atp)}}
+
{{#set: common-name=s-sulfanylglutathione dioxygenase}}
{{#set: nb gene associated=4}}
+
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=3}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 08:33, 15 March 2021

Reaction FESGSHTHIO-RXN

  • direction:
    • left-to-right
  • common-name:
    • s-sulfanylglutathione dioxygenase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • SULFUROX-PWY, sulfur oxidation I (aerobic):
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-5285, sulfide oxidation III (to sulfite):
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7927, sulfide oxidation IV (mitochondria):
    • 2 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR115876
  • RHEA:
  • LIGAND-RXN: