Difference between revisions of "RXN-9667"

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(Created page with "Category:reaction == Reaction RXN-7699 == * direction: ** reversible * common-name: ** d-specific enoyl-coa hydratase * ec-number: ** [http://enzyme.expasy.org/EC/4.2.1.11...")
(Created page with "Category:reaction == Reaction RXN-10707 == * direction: ** left-to-right * common-name: ** fatty-acyl coenzyme a oxidase ** acyl-coa oxidase * ec-number: ** [http://enzyme...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-7699 ==
+
== Reaction RXN-10707 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** d-specific enoyl-coa hydratase
+
** fatty-acyl coenzyme a oxidase
 +
** acyl-coa oxidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.2.1.119 ec-4.2.1.119]
+
** [http://enzyme.expasy.org/EC/1.3.3.6 ec-1.3.3.6]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[D-3-HYDROXYACYL-COA]][c] '''<=>''' 1 [[TRANS-D2-ENOYL-COA]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[CPD-11525]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-11526]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ03584]]
+
* Gene: [[SJ13468]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ04769]]
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ19669]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ07451]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ03090]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ07452]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6657]], polyhydroxydecanoate biosynthesis:
+
* [[PWY-735]], jasmonic acid biosynthesis:
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''16''' reactions found over '''19''' reactions in the full pathway
−
* [[PWY-7288]], fatty acid &beta;-oxidation VII (yeast peroxisome):
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5138]], fatty acid &beta;-oxidation IV (unsaturated, even number):
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY66-391]], fatty acid &beta;-oxidation VI (mammalian peroxisome):
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=left-to-right}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26529 26529]
+
{{#set: common-name=acyl-coa oxidase|fatty-acyl coenzyme a oxidase}}
−
* LIGAND-RXN:
+
{{#set: ec-number=ec-1.3.3.6}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R09698 R09698]
+
{{#set: nb gene associated=5}}
−
{{#set: direction=reversible}}
+
{{#set: nb pathway associated=1}}
−
{{#set: common-name=d-specific enoyl-coa hydratase}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: ec-number=ec-4.2.1.119}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
−
{{#set: nb gene associated=2}}
 
−
{{#set: nb pathway associated=4}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 19:02, 14 January 2021

Reaction RXN-10707

  • direction:
    • left-to-right
  • common-name:
    • fatty-acyl coenzyme a oxidase
    • acyl-coa oxidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-735, jasmonic acid biosynthesis:
    • 16 reactions found over 19 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-9667&oldid=102180"